RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	LRCH4	O75427	683 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	ZNF821	O75541	412 aa	Predicted RBP	15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	IGHV4-34	P06331	123 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	CTSL	P07711	333 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	CD27	P26842	260 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	TPI1	P60174	286 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	ACAP1	Q15027	740 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	POM121L1P	Q3SYA9	428 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	CCDC122	Q5T0U0	273 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	ALKBH5	Q6P6C2	394 aa	Known RBP	15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	TMIE	Q8NEW7	156 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	OR8K1	Q8NGG5	319 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	FAM131C	Q96AQ9	280 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	PEBP4	Q96S96	227 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	DNAJC7	Q99615	494 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	SNRNP25	Q9BV90	132 aa	Known RBP	15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	ZDHHC5	Q9C0B5	715 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	TNKS2	Q9H2K2	1166 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	DHX35	Q9H5Z1	703 aa	Known RBP	15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	NOL6	Q9H6R4	1146 aa	Known RBP	15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	OSGEP	Q9NPF4	335 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	FCF1	Q9Y324	198 aa	Known RBP	15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	TRPM6	Q9BX84	2022 aa		15.34	■□□□□ 0.05
PHGDH-231	ENST00000641939	MED19	A0JLT2	244 aa	Predicted RBP	15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	C10orf142	B7Z368	130 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	KDELR3	O43731	214 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	CD160	O95971	181 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	PRNP	P04156	253 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	CYP1A2	P05177	515 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	TPM1	P09493	284 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	EIF4A3	P38919	411 aa	Known RBP	15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	DNA2	P51530	1060 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	CCR5	P51681	352 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	AFF3	P51826	1226 aa	Known RBP	15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	YBEY	P58557	167 aa	Predicted RBP	15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	CNTN1	Q12860	1018 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	GRIK2	Q13002	908 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	CA9	Q16790	459 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	DPY19L3	Q6ZPD9	716 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	ZNF354C	Q86Y25	554 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	PSTK	Q8IV42	348 aa	Known RBP	15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	UMODL1-AS1	Q8N2C9	162 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	MINDY1	Q8N5J2	469 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	CHST14	Q8NCH0	376 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	ISG20	Q96AZ6	181 aa	Known RBP	15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	ORAI3	Q9BRQ5	295 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	KDM4C	Q9H3R0	1056 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	TM9SF3	Q9HD45	589 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	ZNHIT6	Q9NWK9	470 aa	Known RBP	15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	DONSON	Q9NYP3	566 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	IL36A	Q9UHA7	158 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	TPX2	Q9ULW0	747 aa	Known RBP	15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	ACTL7A	Q9Y615	435 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	SLCO1B1	Q9Y6L6	691 aa		15.33	■□□□□ 0.04
PHGDH-231	ENST00000641939	TBC1D3D	A0A087WVF3	549 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	TBC1D3I	A0A087WXS9	549 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	TBC1D3E	A0A087X179	549 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	TBC1D3K	A0A087X1G2	549 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939		A0A1W2PPC4	97 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	TBC1D3F	A6NER0	549 aa	Predicted RBP	15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	TBC1D3L	B9A6J9	549 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	RASA4B	C9J798	803 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	EEF2K	O00418	725 aa	Known RBP	15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	PLK4	O00444	970 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	KPNA3	O00505	521 aa	Predicted RBP	15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	RASA4	O43374	803 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	PLRG1	O43660	514 aa	Known RBP	15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	OPHN1	O60890	802 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	TBC1D3H	P0C7X1	549 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	KCNA4	P22459	653 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	PCK1	P35558	622 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	CCDC15	Q0P6D6	951 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	PIGH	Q14442	188 aa	Predicted RBP	15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	TEAD4	Q15561	434 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	TSR1	Q2NL82	804 aa	Known RBP	15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	PARP15	Q460N3	678 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	CARD16	Q5EG05	197 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	ARSI	Q5FYB1	569 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	AGBL4	Q5VU57	503 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	TBC1D3G	Q6DHY5	549 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	TBC1D3C	Q6IPX1	549 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	PLPP6	Q8IY26	295 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	TBC1D3	Q8IZP1	549 aa	Predicted RBP	15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	OR2I1P	Q8NGU4	316 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	GRIN3A	Q8TCU5	1115 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	KCTD15	Q96SI1	283 aa	Predicted RBP	15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	NUP85	Q9BW27	656 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	DYRK4	Q9NR20	520 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	DNAAF2	Q9NVR5	837 aa	Known RBP	15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	NENF	Q9UMX5	172 aa		15.32	■□□□□ 0.04
PHGDH-231	ENST00000641939	DAPK3	O43293	454 aa		15.31	■□□□□ 0.04
PHGDH-231	ENST00000641939	BUB1	O43683	1085 aa		15.31	■□□□□ 0.04
PHGDH-231	ENST00000641939	LEFTY1	O75610	366 aa		15.31	■□□□□ 0.04
PHGDH-231	ENST00000641939	KCNK5	O95279	499 aa		15.31	■□□□□ 0.04
PHGDH-231	ENST00000641939	GRIA4	P48058	902 aa		15.31	■□□□□ 0.04
PHGDH-231	ENST00000641939	CSNK1E	P49674	416 aa	Known RBP	15.31	■□□□□ 0.04
PHGDH-231	ENST00000641939	CCNH	P51946	323 aa	Predicted RBP	15.31	■□□□□ 0.04

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms