RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 CYTH1Q15438 398 aa19.18■□□□□ 0.66
MECP2-216ENST00000627864 HNRNPA1L2Q32P51 320 aaKnown RBP19.18■□□□□ 0.66
MECP2-216ENST00000627864 INO80DQ53TQ3 878 aaPredicted RBP19.18■□□□□ 0.66
MECP2-216ENST00000627864 TMEM31Q5JXX7 168 aa19.18■□□□□ 0.66
MECP2-216ENST00000627864 TIGD7Q6NT04 549 aaPredicted RBP19.18■□□□□ 0.66
MECP2-216ENST00000627864 C22orf39Q6P5X5 142 aa19.18■□□□□ 0.66
MECP2-216ENST00000627864 TMEM92Q6UXU6 159 aa19.18■□□□□ 0.66
MECP2-216ENST00000627864 NYAP1Q6ZVC0 841 aa19.18■□□□□ 0.66
MECP2-216ENST00000627864 CCDC13Q8IYE1 715 aa19.18■□□□□ 0.66
MECP2-216ENST00000627864 TTC13Q8NBP0 860 aa19.18■□□□□ 0.66
MECP2-216ENST00000627864 FRS2Q8WU20 508 aa19.18■□□□□ 0.66
MECP2-216ENST00000627864 CASKIN2Q8WXE0 1202 aa19.18■□□□□ 0.66
MECP2-216ENST00000627864 HDAC11Q96DB2 347 aa19.18■□□□□ 0.66
MECP2-216ENST00000627864 C16orf45Q96MC5 204 aaPredicted RBP19.18■□□□□ 0.66
MECP2-216ENST00000627864 OLFM3Q96PB7 478 aa19.18■□□□□ 0.66
MECP2-216ENST00000627864 FAM118BQ9BPY3 351 aa19.18■□□□□ 0.66
MECP2-216ENST00000627864 C1QTNF1Q9BXJ1 281 aa19.18■□□□□ 0.66
MECP2-216ENST00000627864 TNKS2Q9H2K2 1166 aa19.18■□□□□ 0.66
MECP2-216ENST00000627864 VCANP13611 3396 aa19.18■□□□□ 0.66
MECP2-216ENST00000627864 A0A0C4DFX4 3053 aa19.18■□□□□ 0.66
MECP2-216ENST00000627864 PRR33A8MZF0 331 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 H7C0C1 242 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 FGGP02679 453 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 ATP5OP48047 213 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 CXCL12P48061 93 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 EIF3EP60228 445 aaKnown RBP19.17■□□□□ 0.66
MECP2-216ENST00000627864 PPIDQ08752 370 aaKnown RBP19.17■□□□□ 0.66
MECP2-216ENST00000627864 SLC10A7Q0GE19 358 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 LBRQ14739 615 aaKnown RBP19.17■□□□□ 0.66
MECP2-216ENST00000627864 CRY1Q16526 586 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 LONRF2Q1L5Z9 754 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 TMCO4Q5TGY1 634 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 PAPD7Q5XG87 772 aaKnown RBP19.17■□□□□ 0.66
MECP2-216ENST00000627864 KIAA1211LQ6NV74 962 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 Q6ZVU0 165 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 METTL3Q86U44 580 aaKnown RBP19.17■□□□□ 0.66
MECP2-216ENST00000627864 ZSCAN30Q86W11 494 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 DTWD2Q8NBA8 298 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 COG1Q8WTW3 980 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 PTPRN2Q92932 1015 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 MS4A14Q96JA4 679 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 ZNF599Q96NL3 588 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 CEP44Q9C0F1 390 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 BRD8Q9H0E9 1235 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 PRSS16Q9NQE7 514 aa19.17■□□□□ 0.66
MECP2-216ENST00000627864 A0A1W2PQF6 199 aa19.16■□□□□ 0.66
MECP2-216ENST00000627864 TARSL2A2RTX5 802 aaKnown RBP19.16■□□□□ 0.66
MECP2-216ENST00000627864 MATN3O15232 486 aa19.16■□□□□ 0.66
MECP2-216ENST00000627864 FANCGO15287 622 aa19.16■□□□□ 0.66
MECP2-216ENST00000627864 SIN3BO75182 1162 aa19.16■□□□□ 0.66
MECP2-216ENST00000627864 PEX11BO96011 259 aa19.16■□□□□ 0.66
MECP2-216ENST00000627864 TCP1P17987 556 aaKnown RBP19.16■□□□□ 0.66
MECP2-216ENST00000627864 CCR3P51677 355 aa19.16■□□□□ 0.66
MECP2-216ENST00000627864 RHOAP61586 193 aa19.16■□□□□ 0.66
MECP2-216ENST00000627864 SATB1Q01826 763 aa19.16■□□□□ 0.66
MECP2-216ENST00000627864 XRCC4Q13426 336 aa19.16■□□□□ 0.66
MECP2-216ENST00000627864 RFTN1Q14699 578 aaPredicted RBP19.16■□□□□ 0.66
MECP2-216ENST00000627864 RASGEF1CQ8N431 466 aa19.16■□□□□ 0.66
MECP2-216ENST00000627864 PCDH20Q8N6Y1 951 aaKnown RBP19.16■□□□□ 0.66
MECP2-216ENST00000627864 TFB1MQ8WVM0 346 aaKnown RBP19.16■□□□□ 0.66
MECP2-216ENST00000627864 MAIP1Q8WWC4 291 aa19.16■□□□□ 0.66
MECP2-216ENST00000627864 ISG20Q96AZ6 181 aaKnown RBP19.16■□□□□ 0.66
MECP2-216ENST00000627864 CINPQ9BW66 212 aaPredicted RBP19.16■□□□□ 0.66
MECP2-216ENST00000627864 TM6SF2Q9BZW4 377 aa19.16■□□□□ 0.66
MECP2-216ENST00000627864 POLMQ9NP87 494 aaPredicted RBP19.16■□□□□ 0.66
MECP2-216ENST00000627864 R3HDM2Q9Y2K5 976 aaKnown RBP19.16■□□□□ 0.66
MECP2-216ENST00000627864 EML5Q05BV3 1969 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 HACD1B0YJ81 288 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 MCF2LO15068 1137 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 ZNF185O15231 689 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 ZNF821O75541 412 aaPredicted RBP19.15■□□□□ 0.66
MECP2-216ENST00000627864 CCNB1P14635 433 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 PRLRP16471 622 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 RECQLP46063 649 aaPredicted RBP19.15■□□□□ 0.66
MECP2-216ENST00000627864 DGKEP52429 567 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 ZNF33AQ06730 810 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 CAMK2GQ13555 558 aaPredicted RBP19.15■□□□□ 0.66
MECP2-216ENST00000627864 ZNF235Q14590 738 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 PRKD1Q15139 912 aaPredicted RBP19.15■□□□□ 0.66
MECP2-216ENST00000627864 CARD16Q5EG05 197 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 C9orf64Q5T6V5 341 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 MARC1Q5VT66 337 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 DARS2Q6PI48 645 aaKnown RBP19.15■□□□□ 0.66
MECP2-216ENST00000627864 MAMSTRQ6ZN01 415 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 STK40Q8N2I9 435 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 BBS5Q8N3I7 341 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 RYBPQ8N488 228 aaPredicted RBP19.15■□□□□ 0.66
MECP2-216ENST00000627864 C10orf88Q9H8K7 445 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 SEPT10Q9P0V9 454 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 LHX3Q9UBR4 397 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 SEPT3Q9UH03 358 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 SAR1BQ9Y6B6 198 aa19.15■□□□□ 0.66
MECP2-216ENST00000627864 TCRBV21S2A2A0A5A6 115 aa19.14■□□□□ 0.65
MECP2-216ENST00000627864 KCNK1O00180 336 aa19.14■□□□□ 0.65
MECP2-216ENST00000627864 CES2O00748 559 aa19.14■□□□□ 0.65
MECP2-216ENST00000627864 LAMTOR5O43504 91 aa19.14■□□□□ 0.65
MECP2-216ENST00000627864 NEBLO76041 1014 aa19.14■□□□□ 0.65
MECP2-216ENST00000627864 JCHAINP01591 159 aa19.14■□□□□ 0.65
MECP2-216ENST00000627864 RBP3P10745 1247 aa19.14■□□□□ 0.65
MECP2-216ENST00000627864 MMP13P45452 471 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms