RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 CRLF3Q8IUI8 442 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 C20orf27Q9GZN8 174 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 ZNF395Q9H8N7 513 aaPredicted RBP20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 IARS2Q9NSE4 1012 aaKnown RBP20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 MARCH2Q9P0N8 246 aa20.04■□□□□ 0.8
PCDHB11-202ENST00000624887 CBX6O95503 412 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 PEX11BO96011 259 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 IGLV3-27P01718 113 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 SERPINB3P29508 390 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 RASSF2P50749 326 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 HNRNPDQ14103 355 aaKnown RBP20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 POTEHQ6S545 545 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 TFAP2DQ7Z6R9 452 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 C2orf15Q8WU43 125 aaKnown RBP20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 PTCD2Q8WV60 388 aaKnown RBP20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 ATXN7L3BQ96GX2 97 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 TMEM237Q96Q45 408 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 OXCT2Q9BYC2 517 aaPredicted RBP20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 RNF208Q9H0X6 261 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 TMEM216Q9P0N5 145 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 OGDHLQ9ULD0 1010 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 NT5C1B-RDH14C9J2C7 533 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 TRAFD1O14545 582 aaPredicted RBP20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 NEBLO76041 1014 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 ATP6V1G2O95670 118 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 MPOP05164 745 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 FGF3P11487 239 aaPredicted RBP20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 CCL5P13501 91 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 RENBPP51606 427 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 RPL10AP62906 217 aaKnown RBP20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 PCLAFQ15004 111 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 CCDC153Q494R4 210 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 ALFQ53S48 1182 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 C10orf120Q5SQS8 335 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 ACBD5Q5T8D3 534 aaPredicted RBP20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 RANBP10Q6VN20 620 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 ZCCHC23Q6ZST2 131 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 ANKS3Q6ZW76 656 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 MIB1Q86YT6 1006 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 ARID3BQ8IVW6 561 aaPredicted RBP20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 SLC7A6OSQ96CW6 309 aaPredicted RBP20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 MRGPRX2Q96LB1 330 aa20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 RAB3IPQ96QF0 476 aaPredicted RBP20.03■□□□□ 0.8
PCDHB11-202ENST00000624887 TBKBP1A7MCY6 615 aa20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 HNRNPCL1O60812 293 aaKnown RBP20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 PMPCBO75439 489 aa20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 CNTN5O94779 1100 aa20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 HAUS5O94927 633 aa20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 HADHAP40939 763 aa20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 ZBTB16Q05516 673 aa20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 POU6F1Q14863 301 aa20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 FBXL22Q6P050 247 aa20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 TMEM173Q86WV6 379 aaPredicted RBP20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 PPP1R14CQ8TAE6 165 aa20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 HMCESQ96FZ2 354 aa20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 TTPALQ9BTX7 342 aa20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 TUBB6Q9BUF5 446 aa20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 FSD1LQ9BXM9 530 aa20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 SLC25A51Q9H1U9 297 aa20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 MRM3Q9HC36 420 aaKnown RBP20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 COPG2Q9UBF2 871 aa20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 LNPEPQ9UIQ6 1025 aa20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 HBS1LQ9Y450 684 aaKnown RBP20.02■□□□□ 0.8
PCDHB11-202ENST00000624887 C2orf71A6NGG8 1288 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 ZDHHC11BP0C7U3 371 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 PBX3P40426 434 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 RING1Q06587 406 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 DUSP4Q13115 394 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 TAS1R1Q7RTX1 841 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 PPHLN1Q8NEY8 458 aaKnown RBP20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 IGSF8Q969P0 613 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 VPS39Q96JC1 886 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 MYCBPQ99417 103 aaPredicted RBP20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 FBXO6Q9NRD1 293 aaPredicted RBP20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 TCAF1Q9Y4C2 921 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 A0A096LPK6 155 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 SLC12A8A0AV02 714 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 DRGXA6NNA5 263 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 GOLGA8TH3BQL2 631 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 F7P08709 466 aaPredicted RBP20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 KCNA4P22459 653 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 HSF5Q4G112 596 aaPredicted RBP20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 RAP1GAP2Q684P5 730 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 CLEC14AQ86T13 490 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 CNTN4Q8IWV2 1026 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 UTP4Q969X6 686 aaKnown RBP20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 GPR22Q99680 433 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 ZNF212Q9UDV6 495 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 STK38LQ9Y2H1 464 aa20.01■□□□□ 0.79
PCDHB11-202ENST00000624887 CCDC78A2IDD5 438 aa20■□□□□ 0.79
PCDHB11-202ENST00000624887 J3KR12 359 aa20■□□□□ 0.79
PCDHB11-202ENST00000624887 SERPINE1P05121 402 aa20■□□□□ 0.79
PCDHB11-202ENST00000624887 ABCG1P45844 678 aa20■□□□□ 0.79
PCDHB11-202ENST00000624887 ARMC3Q5W041 872 aa20■□□□□ 0.79
PCDHB11-202ENST00000624887 FAM91A1Q658Y4 838 aa20■□□□□ 0.79
PCDHB11-202ENST00000624887 KDELC1Q6UW63 502 aa20■□□□□ 0.79
PCDHB11-202ENST00000624887 ZC3HC1Q86WB0 502 aaKnown RBP20■□□□□ 0.79
PCDHB11-202ENST00000624887 C10orf107Q8IVU9 208 aa20■□□□□ 0.79
PCDHB11-202ENST00000624887 PLD6Q8N2A8 252 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms