RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 MGAT4DA6NG13 374 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 DHFRP00374 187 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 PRLP01236 227 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 MIPP30301 263 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 FSCN1Q16658 493 aaKnown RBP9.02□□□□□ -0.97
VCL-206ENST00000623461 NECAB2Q7Z6G3 386 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 PHF13Q86YI8 300 aaPredicted RBP9.02□□□□□ -0.97
VCL-206ENST00000623461 LRRC57Q8N9N7 239 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 FBXO30Q8TB52 745 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 DDIT4Q9NX09 232 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 SRP68Q9UHB9 627 aaKnown RBP9.02□□□□□ -0.97
VCL-206ENST00000623461 SNX8Q9Y5X2 465 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 PEX16Q9Y5Y5 336 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 IFNGR2P38484 337 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 SLC16A1P53985 500 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 COPZ1P61923 177 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 ECT2LQ008S8 904 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 ZBED5Q49AG3 693 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 ZNF549Q6P9A3 640 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 MPZL3Q6UWV2 235 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 BBS12Q6ZW61 710 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 DPP10Q8N608 796 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 ATP6V0D2Q8N8Y2 350 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 BLOC1S5Q8TDH9 187 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 TINF2Q9BSI4 451 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 ERGIC3Q9Y282 383 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 TDRKHQ9Y2W6 561 aaKnown RBP9.02□□□□□ -0.97
VCL-206ENST00000623461 JCADQ9P266 1359 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 SERPINA1P01009 418 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 MARCKSL1P49006 195 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 ABATP80404 500 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 HERC3Q15034 1050 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 LRRC20Q8TCA0 184 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 TTYH3Q9C0H2 523 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 PIGUQ9H490 435 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 PDGFCQ9NRA1 345 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 PNPOQ9NVS9 261 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 WASF2Q9Y6W5 498 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 CPS1P31327 1500 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 ROBO3Q96MS0 1386 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 NOTOA8MTQ0 251 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 JCHAINP01591 159 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 NADK2Q4G0N4 442 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 USP39Q53GS9 565 aaKnown RBP9.02□□□□□ -0.97
VCL-206ENST00000623461 SPESP1Q6UW49 350 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 FRMD7Q6ZUT3 714 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 MICALL2Q8IY33 904 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 SMYD1Q8NB12 490 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 SEMA4DQ92854 862 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 TPD52L3Q96J77 140 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 PLA2G4CQ9UP65 541 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 PCDHGA10Q9Y5H3 936 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 A0A0A0MRY4 1105 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 UBE2QL1A1L167 161 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 SSNA1O43805 119 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 LGR5O75473 907 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 TIPRLO75663 272 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 GPIP06744 558 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 AMPD1P23109 780 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 TGFBR2P37173 567 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 PTGIRP43119 386 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 TPTEP56180 551 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 PLET1Q6UQ28 207 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 PSTKQ8IV42 348 aaKnown RBP9.02□□□□□ -0.97
VCL-206ENST00000623461 SPATA13Q96N96 652 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.02□□□□□ -0.971e-7■■■□□ 18.3
VCL-206ENST00000623461 EFR3BQ9Y2G0 817 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 AXIN2Q9Y2T1 843 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 RPTORQ8N122 1335 aa9.02□□□□□ -0.97
VCL-206ENST00000623461 NRP2O60462 931 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 PRKCQQ04759 706 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 SP8Q8IXZ3 490 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 C2orf69Q8N8R5 385 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 ALG3Q92685 438 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 TMCO6Q96DC7 493 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 CIB1Q99828 191 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 RBM4BQ9BQ04 359 aaKnown RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 CINPQ9BW66 212 aaPredicted RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 RBM4Q9BWF3 364 aaKnown RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 RHOBTB2Q9BYZ6 727 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 ELOVL6Q9H5J4 265 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 MAN1C1Q9NR34 630 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 TAS2R1Q9NYW7 299 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 PACSIN3Q9UKS6 424 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 ITM2BQ9Y287 266 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 EME2A4GXA9 379 aaPredicted RBP9.01□□□□□ -0.97
VCL-206ENST00000623461 LINGO3P0C6S8 592 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 IDO1P14902 403 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 FGFR2P21802 821 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 S100A3P33764 101 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 PMF1Q6P1K2 205 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 HIPK1Q86Z02 1210 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 MARK4Q96L34 752 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 ZFP42Q96MM3 310 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 TBL1YQ9BQ87 522 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 MECRQ9BV79 373 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 CD320Q9NPF0 282 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 TAS2R13Q9NYV9 303 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 A0A1W2PRG6 482 aa9.01□□□□□ -0.97
VCL-206ENST00000623461 TBX10O75333 385 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms