RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 RBM44Q6ZP01 1051 aaKnown RBP7.26□□□□□ -1.25
COLCA1-205ENST00000620864 MCFD2Q8NI22 146 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 AKT1S1Q96B36 256 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 CHP1Q99653 195 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 PRRX2Q99811 253 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 DGCR6LQ9BY27 220 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 NIF3L1Q9GZT8 377 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 KCTD10Q9H3F6 313 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 RASSF1Q9NS23 344 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 IKZF3Q9UKT9 509 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 GRIP1Q9Y3R0 1128 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 GMPPBQ9Y5P6 360 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 AGLP35573 1532 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 UGT1A5P35504 534 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 RENBPP51606 427 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 IL2P60568 153 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 INAVAQ3KP66 663 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 GJD3Q8N144 294 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 KBTBD7Q8WVZ9 684 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 PDGFCQ9NRA1 345 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 H3BQF6 201 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 FBXO21O94952 628 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 OR6A2O95222 327 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 GLP2RO95838 553 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 RPLP2P05387 115 aaKnown RBP7.26□□□□□ -1.25
COLCA1-205ENST00000620864 PITPNAQ00169 270 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 MTF1Q14872 753 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 SNRNP35Q16560 246 aaKnown RBP7.26□□□□□ -1.25
COLCA1-205ENST00000620864 SLC5A9Q2M3M2 681 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 C11orf74Q86VG3 221 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 COMMD2Q86X83 199 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 ZNF285Q96NJ3 590 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 CITED4Q96RK1 184 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 TCF12Q99081 682 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 SLC39A8Q9C0K1 460 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 CKLFQ9UBR5 152 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 GNPTGQ9UJJ9 305 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 CRYL1Q9Y2S2 319 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 DNAJA2O60884 412 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 GYPCP04921 128 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 STAG3L1P0CL83 205 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 ITGB6P18564 788 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 MAPK9P45984 424 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 TAF13Q15543 124 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 CCSAPQ6IQ19 270 aaPredicted RBP7.26□□□□□ -1.25
COLCA1-205ENST00000620864 KDELC2Q7Z4H8 507 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 METTL16Q86W50 562 aaKnown RBP7.26□□□□□ -1.25
COLCA1-205ENST00000620864 ZNF655Q8N720 491 aaPredicted RBP7.26□□□□□ -1.25
COLCA1-205ENST00000620864 TRIM2Q9C040 744 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 MTF2Q9Y483 593 aaPredicted RBP7.26□□□□□ -1.25
COLCA1-205ENST00000620864 IGSF9BQ9UPX0 1349 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 PRODHO43272 600 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 METTL18O95568 372 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 SLC25A27O95847 323 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 RFX3P48380 749 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 NPY2RP49146 381 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 RHEBQ15382 184 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 SLC9A4Q6AI14 798 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 FRMD7Q6ZUT3 714 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 RDH11Q8TC12 318 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 EZH1Q92800 747 aaPredicted RBP7.26□□□□□ -1.25
COLCA1-205ENST00000620864 ZCCHC2Q9C0B9 1178 aaKnown RBP7.26□□□□□ -1.25
COLCA1-205ENST00000620864 NMRK2Q9NPI5 230 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 ADAM28Q9UKQ2 775 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 CDH7Q9ULB5 785 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 INVSQ9Y283 1065 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 RBMX2Q9Y388 322 aaKnown RBP7.26□□□□□ -1.25
COLCA1-205ENST00000620864 ZMYM2Q9UBW7 1377 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 BBIP1A8MTZ0 92 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 PGAM1P18669 254 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 ARFIP1P53367 373 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 OXCT1P55809 520 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 USP46P62068 366 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 SHC4Q6S5L8 630 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 C16orf59Q7L2K0 433 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 KBTBD2Q8IY47 623 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 ADCY4Q8NFM4 1077 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 FRMD6Q96NE9 622 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 SEPHS2Q99611 448 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 PTTG2Q9NZH5 202 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 PTGFRNQ9P2B2 879 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 XPR1Q9UBH6 696 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 LRRC14BA6NHZ5 514 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 IRF6O14896 467 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 SCGNO76038 276 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 LRIG2O94898 1065 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 HIST1H2ABP04908 130 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 ARF4P18085 180 aaPredicted RBP7.26□□□□□ -1.25
COLCA1-205ENST00000620864 MRPS5P82675 430 aaKnown RBP7.26□□□□□ -1.25
COLCA1-205ENST00000620864 ARF5P84085 180 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 TRIM32Q13049 653 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 NOL9Q5SY16 702 aaKnown RBP7.26□□□□□ -1.25
COLCA1-205ENST00000620864 SWSAP1Q6NVH7 229 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 HIST3H2AQ7L7L0 130 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 ZNF540Q8NDQ6 660 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 ACMSDQ8TDX5 336 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 USP7Q93009 1102 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 HIST1H2ACQ93077 130 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.26□□□□□ -1.25
COLCA1-205ENST00000620864 ANGPT4Q9Y264 503 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms