RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 NDST2P52849 883 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 SLC5A3P53794 718 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 LAMTOR4Q0VGL1 99 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 NOGQ13253 232 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 DEFB115Q30KQ5 88 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 BOLA3Q53S33 107 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 SEL1L3Q68CR1 1132 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 GRAMD4Q6IC98 578 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 DLK2Q6UY11 383 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 CPB2Q96IY4 423 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 ACO2Q99798 780 aaKnown RBP7.06□□□□□ -1.28
NEDD9-216ENST00000620854 RTKNQ9BST9 563 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 SPON2Q9BUD6 331 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 FRMD8P1Q9BZ68 369 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-216ENST00000620854 TRIM8Q9BZR9 551 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 DHX33Q9H6R0 707 aaKnown RBP7.06□□□□□ -1.28
NEDD9-216ENST00000620854 CYP4F12Q9HCS2 524 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 ZDHHC2Q9UIJ5 367 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 SIX4Q9UIU6 781 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 STYXL1Q9Y6J8 313 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 GOLGA8CPA6NN73 597 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 LACTBL1A8MY62 500 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 NRP1O14786 923 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 DENRO43583 198 aaKnown RBP7.06□□□□□ -1.28
NEDD9-216ENST00000620854 MSCO60682 206 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF189O75820 626 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-216ENST00000620854 CHEK2O96017 543 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 PRKCGP05129 697 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 GNAO1P09471 354 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 IMPDH2P12268 514 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 UBA1P22314 1058 aaKnown RBP7.06□□□□□ -1.28
NEDD9-216ENST00000620854 GNL1P36915 607 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-216ENST00000620854 GRIA4P48058 902 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 ITGA7Q13683 1181 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 USP10Q14694 798 aaKnown RBP7.06□□□□□ -1.28
NEDD9-216ENST00000620854 GOLGA7BQ2TAP0 167 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 PPP1R26Q5T8A7 1209 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-216ENST00000620854 NAT16Q8N8M0 369 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 FNIP1Q8TF40 1166 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 PPP1R13LQ8WUF5 828 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 KBTBD7Q8WVZ9 684 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 HTR3CQ8WXA8 447 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 THAP11Q96EK4 314 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 HPDLQ96IR7 371 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 ZFRQ96KR1 1074 aaKnown RBP7.06□□□□□ -1.28
NEDD9-216ENST00000620854 FCRL3Q96P31 734 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-216ENST00000620854 NMRAL1Q9HBL8 299 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 IARS2Q9NSE4 1012 aaKnown RBP7.06□□□□□ -1.28
NEDD9-216ENST00000620854 WDR70Q9NW82 654 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 CDC14AQ9UNH5 594 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 CEPT1Q9Y6K0 416 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 NRAPQ86VF7 1730 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 ADGRA2Q96PE1 1338 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 LAMA3Q16787 3333 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 DOCK5Q9H7D0 1870 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 NEMP2A6NFY4 417 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 RNF103O00237 685 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 DFFAO00273 331 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 CYP3A5P20815 502 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 ARL2P36404 184 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 PDAP1Q13442 181 aaKnown RBP7.06□□□□□ -1.28
NEDD9-216ENST00000620854 GLRA4Q5JXX5 417 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 CERCAMQ5T4B2 595 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 EPGNQ6UW88 154 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 C16orf89Q6UX73 402 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 ZBTB49Q6ZSB9 765 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 CCDC185Q8N715 623 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 NRBF2Q96F24 287 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 C12orf42Q96LP6 360 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 TINF2Q9BSI4 451 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 MINDY3Q9H8M7 445 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 DTLQ9NZJ0 730 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 FAM8A1Q9UBU6 413 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 AP4E1Q9UPM8 1137 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF510Q9Y2H8 683 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 AP4S1Q9Y587 144 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 C17orf102A2RUQ5 167 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 SYCE1LA8MT33 242 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 BTBD19C9JJ37 291 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 MT-ND1P03886 318 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 POLBP06746 335 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 ADCYAP1R1P41586 468 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 RABGGTBP53611 331 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 EMP3P54852 163 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 TAZQ16635 292 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF423Q2M1K9 1284 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 MGAT5BQ3V5L5 792 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 NOL9Q5SY16 702 aaKnown RBP7.06□□□□□ -1.28
NEDD9-216ENST00000620854 POTEHQ6S545 545 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 MCRS1Q96EZ8 462 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 EFCAB1Q9HAE3 211 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 CHRAC1Q9NRG0 131 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 DNAJC28Q9NX36 388 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 RIMS3Q9UJD0 308 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 RUVBL2Q9Y230 463 aaKnown RBP7.06□□□□□ -1.28
NEDD9-216ENST00000620854 RNF11Q9Y3C5 154 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 SCN9AQ15858 1988 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF839A8K0R7 811 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 J3QRK9 145 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 VAPBO95292 243 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms