RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 K7ERQ8 282 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 SMAD6O43541 496 aaKnown RBP15.9■□□□□ 0.14
RPP40-207ENST00000618533 PRAMEF11O60813 436 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 NDUFS2O75306 463 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 EPN2O95208 641 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 GSRP00390 522 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 VAV1P15498 845 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 BCKDHBP21953 392 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 KDELR1P24390 212 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 PAPOLAP51003 745 aaKnown RBP15.9■□□□□ 0.14
RPP40-207ENST00000618533 SNRPD1P62314 119 aaKnown RBP15.9■□□□□ 0.14
RPP40-207ENST00000618533 IL10RBQ08334 325 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 RFTN1Q14699 578 aaPredicted RBP15.9■□□□□ 0.14
RPP40-207ENST00000618533 ATP13A4Q4VNC1 1196 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 ANKRD20A8PQ5CZ79 823 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 CARD16Q5EG05 197 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 ASCL5Q7RTU5 278 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 DAAM2Q86T65 1068 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 CPNE8Q86YQ8 564 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 MMAAQ8IVH4 418 aaKnown RBP15.9■□□□□ 0.14
RPP40-207ENST00000618533 LRRC8AQ8IWT6 810 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 ARHGAP12Q8IWW6 846 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 GPR161Q8N6U8 529 aaKnown RBP15.9■□□□□ 0.14
RPP40-207ENST00000618533 NPWQ8N729 165 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 TMIEQ8NEW7 156 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 CADM4Q8NFZ8 388 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 UBE2Q2Q8WVN8 375 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 FOXJ1Q92949 421 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 ERLEC1Q96DZ1 483 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 ZNF599Q96NL3 588 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 TSGA10Q9BZW7 698 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 SP110Q9HB58 689 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 PDFQ9HBH1 243 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 UBA2Q9UBT2 640 aaPredicted RBP15.9■□□□□ 0.14
RPP40-207ENST00000618533 MBD1Q9UIS9 605 aaPredicted RBP15.9■□□□□ 0.14
RPP40-207ENST00000618533 PPM1HQ9ULR3 514 aa15.9■□□□□ 0.14
RPP40-207ENST00000618533 FAM186AA6NE01 2351 aa15.89■□□□□ 0.13
RPP40-207ENST00000618533 LRRD1A4D1F6 860 aa15.89■□□□□ 0.13
RPP40-207ENST00000618533 RCCD1A6NED2 376 aa15.89■□□□□ 0.13
RPP40-207ENST00000618533 SLC7A4O43246 635 aa15.89■□□□□ 0.13
RPP40-207ENST00000618533 FOXD2O60548 495 aaPredicted RBP15.89■□□□□ 0.13
RPP40-207ENST00000618533 ZNF821O75541 412 aaPredicted RBP15.89■□□□□ 0.13
RPP40-207ENST00000618533 IL1BP01584 269 aa15.89■□□□□ 0.13
RPP40-207ENST00000618533 CHRNA3P32297 505 aa15.89■□□□□ 0.13
RPP40-207ENST00000618533 SLC8A1P32418 973 aa15.89■□□□□ 0.13
RPP40-207ENST00000618533 PSMD8P48556 350 aa15.89■□□□□ 0.13
RPP40-207ENST00000618533 NAP1L1P55209 391 aaKnown RBP15.89■□□□□ 0.13
RPP40-207ENST00000618533 RPL6Q02878 288 aaKnown RBP15.89■□□□□ 0.13
RPP40-207ENST00000618533 PAFAH1B3Q15102 231 aaKnown RBP15.89■□□□□ 0.13
RPP40-207ENST00000618533 SYCE1Q8N0S2 351 aa15.89■□□□□ 0.13
RPP40-207ENST00000618533 OR2AP1Q8NGE2 309 aa15.89■□□□□ 0.13
RPP40-207ENST00000618533 TOE1Q96GM8 510 aaKnown RBP15.89■□□□□ 0.13
RPP40-207ENST00000618533 CELF6Q96J87 481 aaKnown RBP15.89■□□□□ 0.13
RPP40-207ENST00000618533 OMDQ99983 421 aa15.89■□□□□ 0.13
RPP40-207ENST00000618533 LACRTQ9GZZ8 138 aa15.89■□□□□ 0.13
RPP40-207ENST00000618533 BTBD1Q9H0C5 482 aa15.89■□□□□ 0.13
RPP40-207ENST00000618533 FBXL12Q9NXK8 326 aa15.89■□□□□ 0.13
RPP40-207ENST00000618533 IL36AQ9UHA7 158 aa15.89■□□□□ 0.13
RPP40-207ENST00000618533 TPX2Q9ULW0 747 aaKnown RBP15.89■□□□□ 0.13
RPP40-207ENST00000618533 INVSQ9Y283 1065 aa15.89■□□□□ 0.13
RPP40-207ENST00000618533 FCF1Q9Y324 198 aaKnown RBP15.89■□□□□ 0.13
RPP40-207ENST00000618533 DFFAO00273 331 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 MID1O15344 667 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 TMCC1O94876 653 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 IGSF6O95976 241 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 CD48P09326 243 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 ZFXP17010 805 aaPredicted RBP15.88■□□□□ 0.13
RPP40-207ENST00000618533 HOXD12P35452 270 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 RAD51Q06609 339 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 MMRN1Q13201 1228 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 GRM3Q14832 879 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 DPY19L3Q6ZPD9 716 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 CACUL1Q86Y37 369 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 KATNAL2Q8IYT4 538 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 RNF10Q8N5U6 811 aaKnown RBP15.88■□□□□ 0.13
RPP40-207ENST00000618533 PCDH19Q8TAB3 1148 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 PIP4K2CQ8TBX8 421 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 KIAA1524Q8TCG1 905 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 RAPGEF5Q92565 580 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 FAM131CQ96AQ9 280 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 ZNF419Q96HQ0 510 aaPredicted RBP15.88■□□□□ 0.13
RPP40-207ENST00000618533 PPP1R16AQ96I34 528 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 GDAP1L1Q96MZ0 367 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 RNF157Q96PX1 679 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 HEPHQ9BQS7 1158 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 KDM4CQ9H3R0 1056 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 KLHL11Q9NVR0 708 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 IPO11Q9UI26 975 aaKnown RBP15.88■□□□□ 0.13
RPP40-207ENST00000618533 SALL4Q9UJQ4 1053 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 TFR2Q9UP52 801 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 ADGRG1Q9Y653 693 aa15.88■□□□□ 0.13
RPP40-207ENST00000618533 RIF1Q5UIP0 2472 aaKnown RBP15.88■□□□□ 0.13
RPP40-207ENST00000618533 SHROOM3Q8TF72 1996 aa15.87■□□□□ 0.13
RPP40-207ENST00000618533 KRT86O43790 486 aa15.87■□□□□ 0.13
RPP40-207ENST00000618533 BNIP3LO60238 219 aa15.87■□□□□ 0.13
RPP40-207ENST00000618533 POP4O95707 220 aaKnown RBP15.87■□□□□ 0.13
RPP40-207ENST00000618533 KRT1P04264 644 aa15.87■□□□□ 0.13
RPP40-207ENST00000618533 MX2P20592 715 aa15.87■□□□□ 0.13
RPP40-207ENST00000618533 HSPA9P38646 679 aaKnown RBP15.87■□□□□ 0.13
RPP40-207ENST00000618533 DHPSP49366 369 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms