RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 THAP2Q9H0W7 228 aa15.21■□□□□ 0.03
COL5A1-208ENST00000618395 UGT2B4P06133 528 aa15.21■□□□□ 0.02
COL5A1-208ENST00000618395 ATP5F1P24539 256 aaPredicted RBP15.21■□□□□ 0.02
COL5A1-208ENST00000618395 PPP2R2BQ00005 443 aa15.21■□□□□ 0.02
COL5A1-208ENST00000618395 DPP9Q86TI2 863 aa15.21■□□□□ 0.02
COL5A1-208ENST00000618395 DNAAF5Q86Y56 855 aa15.21■□□□□ 0.02
COL5A1-208ENST00000618395 SLITRK4Q8IW52 837 aa15.21■□□□□ 0.02
COL5A1-208ENST00000618395 OXR1Q8N573 874 aa15.21■□□□□ 0.02
COL5A1-208ENST00000618395 ABCB9Q9NP78 766 aa15.21■□□□□ 0.02
COL5A1-208ENST00000618395 POLRMTO00411 1230 aaKnown RBP15.2■□□□□ 0.02
COL5A1-208ENST00000618395 FBP2O00757 339 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 PTX3P26022 381 aaPredicted RBP15.2■□□□□ 0.02
COL5A1-208ENST00000618395 ACAD10Q6JQN1 1059 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 PPP1R18Q6NYC8 613 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 RBM43Q6ZSC3 357 aaKnown RBP15.2■□□□□ 0.02
COL5A1-208ENST00000618395 MYH14Q7Z406 1995 aaKnown RBP15.2■□□□□ 0.02
COL5A1-208ENST00000618395 CHST10O43529 356 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 MOCS2O96007 188 aaPredicted RBP15.2■□□□□ 0.02
COL5A1-208ENST00000618395 CDKL4Q5MAI5 379 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 INTS11Q5TA45 600 aaKnown RBP15.2■□□□□ 0.02
COL5A1-208ENST00000618395 CFAP206Q8IYR0 622 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 TEX19Q8NA77 164 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 ASB15Q8WXK1 588 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 TRIM43Q96BQ3 446 aaPredicted RBP15.2■□□□□ 0.02
COL5A1-208ENST00000618395 APOL2Q9BQE5 337 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 MROH7-TTC4A0A0A0MT08 1334 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 PDE8BO95263 885 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 GCP02774 474 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 HOXA13P31271 388 aaPredicted RBP15.2■□□□□ 0.02
COL5A1-208ENST00000618395 CCNG2Q16589 344 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 Q3C1V9 767 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 PCID2Q5JVF3 399 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 RP9Q8TA86 221 aaKnown RBP15.2■□□□□ 0.02
COL5A1-208ENST00000618395 C1GALT1C1Q96EU7 318 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 WRBO00258 174 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 AIREO43918 545 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 ARHGEF7Q14155 803 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 PHC3Q8NDX5 983 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 CYP3A43Q9HB55 503 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 VANGL2Q9ULK5 521 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 CORO2BQ9UQ03 480 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 PLB1Q6P1J6 1458 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 GSTT2BP0CG30 244 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 GYG1P46976 350 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 MTA1Q13330 715 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 UBAP2LQ14157 1087 aaKnown RBP15.2■□□□□ 0.02
COL5A1-208ENST00000618395 MTX3Q5HYI7 312 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 SNAP47Q5SQN1 464 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 ACOT12Q8WYK0 555 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 TMEM121Q9BTD3 319 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 PCDH9Q9HC56 1237 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 CAPN8A6NHC0 703 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 C2CD2LO14523 706 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 SPTLC1O15269 473 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 SSX4O60224 188 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 PITPNAQ00169 270 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 FAM92BQ6ZTR7 304 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 HSPBAP1Q96EW2 488 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 GSC2O15499 205 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 PTPN6P29350 595 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 CYP4F8P98187 520 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 ZZZ3Q8IYH5 903 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 LRRN4CLQ8ND94 238 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 SLC4A5Q9BY07 1137 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 PCDHGC5Q9Y5F6 944 aa15.2■□□□□ 0.02
COL5A1-208ENST00000618395 KIAA0391O15091 583 aaKnown RBP15.19■□□□□ 0.02
COL5A1-208ENST00000618395 IPO13O94829 963 aaKnown RBP15.19■□□□□ 0.02
COL5A1-208ENST00000618395 H6PDO95479 791 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 ASLP04424 464 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 IL13P35225 146 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 HERVK_113P62684 666 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 LPCAT4Q643R3 524 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 ZNF549Q6P9A3 640 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 PTCHD4Q6ZW05 846 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 SLC22A1O15245 554 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 PLA2G6O60733 806 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 ILF3Q12906 894 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL5A1-208ENST00000618395 SNAPC1Q16533 368 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 FASTKD5Q7L8L6 764 aaKnown RBP15.19■□□□□ 0.02
COL5A1-208ENST00000618395 DSG4Q86SJ6 1040 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 COG5Q9UP83 839 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 PDE4DIPQ5VU43 2346 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 CYP7B1O75881 506 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 DNTTP04053 509 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 GTF2E2P29084 291 aaKnown RBP15.19■□□□□ 0.02
COL5A1-208ENST00000618395 HECTD3Q5T447 861 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 OGFOD2Q6N063 350 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 PHF20Q9BVI0 1012 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 LY9Q9HBG7 655 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 RPL14P50914 215 aaKnown RBP15.19■□□□□ 0.02
COL5A1-208ENST00000618395 KIF18BQ86Y91 864 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 TOP1MTQ969P6 601 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 TBCDQ9BTW9 1192 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 MID1IP1Q9NPA3 183 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 POLR1DQ9Y2S0 133 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 CYP2C9P11712 490 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 RFX3P48380 749 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 SMIM11AP58511 58 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 ZNF621Q6ZSS3 439 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 OR8K3Q8NH51 312 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms