RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 B4GALNT4Q76KP1 1039 aa23.09■■□□□ 1.29
CBWD3-213ENST00000618217 TRMT11Q7Z4G4 463 aaKnown RBP23.09■■□□□ 1.29
CBWD3-213ENST00000618217 ZC3H18Q86VM9 953 aaKnown RBP23.09■■□□□ 1.29
CBWD3-213ENST00000618217 CASKIN2Q8WXE0 1202 aa23.09■■□□□ 1.29
CBWD3-213ENST00000618217 ZNF419Q96HQ0 510 aaPredicted RBP23.09■■□□□ 1.29
CBWD3-213ENST00000618217 CD248Q9HCU0 757 aa23.09■■□□□ 1.29
CBWD3-213ENST00000618217 C11orf16Q9NQ32 467 aa23.09■■□□□ 1.29
CBWD3-213ENST00000618217 SMARCAL1Q9NZC9 954 aa23.09■■□□□ 1.29
CBWD3-213ENST00000618217 HACD1B0YJ81 288 aa23.08■■□□□ 1.29
CBWD3-213ENST00000618217 HLA-EP13747 358 aa23.08■■□□□ 1.29
CBWD3-213ENST00000618217 NNMTP40261 264 aa23.08■■□□□ 1.29
CBWD3-213ENST00000618217 WASP42768 502 aa23.08■■□□□ 1.29
CBWD3-213ENST00000618217 SLC10A7Q0GE19 358 aa23.08■■□□□ 1.29
CBWD3-213ENST00000618217 LONRF2Q1L5Z9 754 aa23.08■■□□□ 1.29
CBWD3-213ENST00000618217 HNRNPA1L2Q32P51 320 aaKnown RBP23.08■■□□□ 1.29
CBWD3-213ENST00000618217 TIGD7Q6NT04 549 aaPredicted RBP23.08■■□□□ 1.29
CBWD3-213ENST00000618217 CCDC13Q8IYE1 715 aa23.08■■□□□ 1.29
CBWD3-213ENST00000618217 TEX26Q8N6G2 289 aa23.08■■□□□ 1.29
CBWD3-213ENST00000618217 ZNF366Q8N895 744 aa23.08■■□□□ 1.29
CBWD3-213ENST00000618217 TFB1MQ8WVM0 346 aaKnown RBP23.08■■□□□ 1.29
CBWD3-213ENST00000618217 ISG20Q96AZ6 181 aaKnown RBP23.08■■□□□ 1.29
CBWD3-213ENST00000618217 QKIQ96PU8 341 aaKnown RBP eCLIP23.08■■□□□ 1.29
CBWD3-213ENST00000618217 CEP44Q9C0F1 390 aa23.08■■□□□ 1.29
CBWD3-213ENST00000618217 MTG2Q9H4K7 406 aa23.08■■□□□ 1.29
CBWD3-213ENST00000618217 C2orf42Q9NWW7 574 aa23.08■■□□□ 1.29
CBWD3-213ENST00000618217 MMP17Q9ULZ9 603 aa23.08■■□□□ 1.29
CBWD3-213ENST00000618217 FCF1Q9Y324 198 aaKnown RBP23.08■■□□□ 1.29
CBWD3-213ENST00000618217 CUL9Q8IWT3 2517 aa23.08■■□□□ 1.28
CBWD3-213ENST00000618217 A0A1W2PQF6 199 aa23.08■■□□□ 1.28
CBWD3-213ENST00000618217 PGRMC1O00264 195 aaKnown RBP23.08■■□□□ 1.28
CBWD3-213ENST00000618217 TMCC1O94876 653 aa23.08■■□□□ 1.28
CBWD3-213ENST00000618217 VAV1P15498 845 aa23.08■■□□□ 1.28
CBWD3-213ENST00000618217 EIF3EP60228 445 aaKnown RBP23.08■■□□□ 1.28
CBWD3-213ENST00000618217 HNRNPDQ14103 355 aaKnown RBP23.08■■□□□ 1.28
CBWD3-213ENST00000618217 RFTN1Q14699 578 aaPredicted RBP23.08■■□□□ 1.28
CBWD3-213ENST00000618217 SLC45A4Q5BKX6 768 aa23.08■■□□□ 1.28
CBWD3-213ENST00000618217 TMCO4Q5TGY1 634 aa23.08■■□□□ 1.28
CBWD3-213ENST00000618217 METTL3Q86U44 580 aaKnown RBP23.08■■□□□ 1.28
CBWD3-213ENST00000618217 MAIP1Q8WWC4 291 aa23.08■■□□□ 1.28
CBWD3-213ENST00000618217 ATG4AQ8WYN0 398 aa23.08■■□□□ 1.28
CBWD3-213ENST00000618217 PTPRN2Q92932 1015 aa23.08■■□□□ 1.28
CBWD3-213ENST00000618217 POLR3BQ9NW08 1133 aaPredicted RBP23.08■■□□□ 1.28
CBWD3-213ENST00000618217 RBP3P10745 1247 aa23.07■■□□□ 1.28
CBWD3-213ENST00000618217 MAGEA9P43362 315 aa23.07■■□□□ 1.28
CBWD3-213ENST00000618217 AP1B1Q10567 949 aa23.07■■□□□ 1.28
CBWD3-213ENST00000618217 LBRQ14739 615 aaKnown RBP23.07■■□□□ 1.28
CBWD3-213ENST00000618217 C22orf39Q6P5X5 142 aa23.07■■□□□ 1.28
CBWD3-213ENST00000618217 MAMSTRQ6ZN01 415 aa23.07■■□□□ 1.28
CBWD3-213ENST00000618217 SPEM1Q8N4L4 309 aa23.07■■□□□ 1.28
CBWD3-213ENST00000618217 C1orf54Q8WWF1 131 aa23.07■■□□□ 1.28
CBWD3-213ENST00000618217 FRMD8P1Q9BZ68 369 aaPredicted RBP23.07■■□□□ 1.28
CBWD3-213ENST00000618217 C10orf88Q9H8K7 445 aa23.07■■□□□ 1.28
CBWD3-213ENST00000618217 LHX3Q9UBR4 397 aa23.07■■□□□ 1.28
CBWD3-213ENST00000618217 DNPEPQ9ULA0 475 aa23.07■■□□□ 1.28
CBWD3-213ENST00000618217 KCNK1O00180 336 aa23.06■■□□□ 1.28
CBWD3-213ENST00000618217 ATG13O75143 517 aa23.06■■□□□ 1.28
CBWD3-213ENST00000618217 CCNB1P14635 433 aa23.06■■□□□ 1.28
CBWD3-213ENST00000618217 IFI35P80217 286 aaPredicted RBP23.06■■□□□ 1.28
CBWD3-213ENST00000618217 MTAPQ13126 283 aa23.06■■□□□ 1.28
CBWD3-213ENST00000618217 CAMK2GQ13555 558 aaPredicted RBP23.06■■□□□ 1.28
CBWD3-213ENST00000618217 CCNG2Q16589 344 aa23.06■■□□□ 1.28
CBWD3-213ENST00000618217 ACCSLQ4AC99 568 aa23.06■■□□□ 1.28
CBWD3-213ENST00000618217 C9orf64Q5T6V5 341 aa23.06■■□□□ 1.28
CBWD3-213ENST00000618217 SDE2Q6IQ49 451 aa23.06■■□□□ 1.28
CBWD3-213ENST00000618217 TMEM92Q6UXU6 159 aa23.06■■□□□ 1.28
CBWD3-213ENST00000618217 SYT13Q7L8C5 426 aa23.06■■□□□ 1.28
CBWD3-213ENST00000618217 FBXL6Q8N531 539 aa23.06■■□□□ 1.28
CBWD3-213ENST00000618217 PRELID2Q8N945 189 aa23.06■■□□□ 1.28
CBWD3-213ENST00000618217 NKD2Q969F2 451 aaPredicted RBP23.06■■□□□ 1.28
CBWD3-213ENST00000618217 NAP1L3Q99457 506 aaPredicted RBP23.06■■□□□ 1.28
CBWD3-213ENST00000618217 IL12RB2Q99665 862 aa23.06■■□□□ 1.28
CBWD3-213ENST00000618217 IER2Q9BTL4 223 aa23.06■■□□□ 1.28
CBWD3-213ENST00000618217 SUN2Q9UH99 717 aa23.06■■□□□ 1.28
CBWD3-213ENST00000618217 EDDM13A0A1B0GTR0 161 aa23.05■■□□□ 1.28
CBWD3-213ENST00000618217 BCLAF3A2AJT9 711 aaKnown RBP23.05■■□□□ 1.28
CBWD3-213ENST00000618217 H7C0C1 242 aa23.05■■□□□ 1.28
CBWD3-213ENST00000618217 MCF2LO15068 1137 aa23.05■■□□□ 1.28
CBWD3-213ENST00000618217 LIASO43766 372 aa23.05■■□□□ 1.28
CBWD3-213ENST00000618217 EPHX1P07099 455 aa23.05■■□□□ 1.28
CBWD3-213ENST00000618217 ATP5OP48047 213 aa23.05■■□□□ 1.28
CBWD3-213ENST00000618217 RENBPP51606 427 aa23.05■■□□□ 1.28
CBWD3-213ENST00000618217 OASLQ15646 514 aaKnown RBP23.05■■□□□ 1.28
CBWD3-213ENST00000618217 EOGTQ5NDL2 527 aa23.05■■□□□ 1.28
CBWD3-213ENST00000618217 MARC1Q5VT66 337 aa23.05■■□□□ 1.28
CBWD3-213ENST00000618217 KIAA1211LQ6NV74 962 aa23.05■■□□□ 1.28
CBWD3-213ENST00000618217 PLPP6Q8IY26 295 aa23.05■■□□□ 1.28
CBWD3-213ENST00000618217 PGBD5Q8N414 524 aa23.05■■□□□ 1.28
CBWD3-213ENST00000618217 PCDH20Q8N6Y1 951 aaKnown RBP23.05■■□□□ 1.28
CBWD3-213ENST00000618217 TMEM105Q8N8V8 129 aa23.05■■□□□ 1.28
CBWD3-213ENST00000618217 TSEN2Q8NCE0 465 aaKnown RBP23.05■■□□□ 1.28
CBWD3-213ENST00000618217 PSKH2Q96QS6 385 aa23.05■■□□□ 1.28
CBWD3-213ENST00000618217 USP29Q9HBJ7 922 aa23.05■■□□□ 1.28
CBWD3-213ENST00000618217 PRSS16Q9NQE7 514 aa23.05■■□□□ 1.28
CBWD3-213ENST00000618217 CACNA1IQ9P0X4 2223 aa23.05■■□□□ 1.28
CBWD3-213ENST00000618217 TARSL2A2RTX5 802 aaKnown RBP23.04■■□□□ 1.28
CBWD3-213ENST00000618217 PDE2AO00408 941 aaPredicted RBP23.04■■□□□ 1.28
CBWD3-213ENST00000618217 MUSKO15146 869 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 HOXB2P14652 356 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 COL9A1P20849 921 aa23.04■■□□□ 1.28
CBWD3-213ENST00000618217 WASHC5Q12768 1159 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms