RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CCNT2O60583 730 aaKnown RBP9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 EPHX1P07099 455 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 ANXA6P08133 673 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 SCNN1AP37088 669 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 MAMLD1Q13495 774 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 FAM133BQ5BKY9 247 aaKnown RBP9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 ZC3H12BQ5HYM0 836 aaKnown RBP9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 STXBP5Q5T5C0 1151 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 TMEM164Q5U3C3 297 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 C7orf43Q8WVR3 580 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 MCRS1Q96EZ8 462 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 PCBD2Q9H0N5 130 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 ELOVL2Q9NXB9 296 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 OPTCQ9UBM4 332 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 FKBP9O95302 570 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 ADH1BP00325 375 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 CLCNKBP51801 687 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 USP39Q53GS9 565 aaKnown RBP9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 FKBP9P1Q75LS8 142 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 SPATA21Q7Z572 469 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 LRRC1Q9BTT6 524 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 MFHAS1Q9Y4C4 1052 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 TIMP1P01033 207 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 ADRA1DP25100 572 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 IFNGR2P38484 337 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 ILF3Q12906 894 aaKnown RBP eCLIP9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 ARHGAP17Q68EM7 881 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 PIP4K2CQ8TBX8 421 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 NEK6Q9HC98 313 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 SLC2A4RGQ9NR83 387 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 DNAAF2Q9NVR5 837 aaKnown RBP9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 TMCC3Q9ULS5 477 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 C5P01031 1676 aa9.87□□□□□ -0.83
TNFRSF9-204ENST00000615230 NRP1O14786 923 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 OXTRP30559 389 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 GGCXP38435 758 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 SESN3P58005 492 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 PARP9Q8IXQ6 854 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 CYP4Z2PQ8N1L4 340 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 CAMKK1Q8N5S9 505 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 JADE3Q92613 823 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 NR1H4Q96RI1 486 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 ROGDIQ9GZN7 287 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 SUSD2Q9UGT4 822 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 EDDM13A0A1B0GTR0 161 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 KLHL41O60662 606 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 ADH5P11766 374 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 CD86P42081 329 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 CLNS1AP54105 237 aaKnown RBP9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 ATP6V0D1P61421 351 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 CCZ1BP86790 482 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 CCZ1P86791 482 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 WDR59Q6PJI9 974 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 CHMP1BQ7LBR1 199 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 SHC3Q92529 594 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 PHF21AQ96BD5 680 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 MBOAT7Q96N66 472 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 EXO5Q9H790 373 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 BLOC1S6Q9UL45 172 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 PHF24Q9UPV7 400 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 IGLV3-22A0A075B6J6 115 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 RNF103-CHMP3A0A140T963 221 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 PAGE1O75459 146 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 TRPC1P48995 793 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 ZSCAN1Q8NBB4 408 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 MS4A14Q96JA4 679 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 PNKPQ96T60 521 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 NSUN3Q9H649 340 aaKnown RBP9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 ZSCAN9O15535 394 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 MAGEA11P43364 429 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 MROH9Q5TGP6 573 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 LRRC8BQ6P9F7 803 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 ZNF599Q96NL3 588 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 ECSITQ9BQ95 431 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 IRF2BPLQ9H1B7 796 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 NRDE2Q9H7Z3 1164 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 STXBP5LQ9Y2K9 1186 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 SLC28A1O00337 649 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 RNASEH2AO75792 299 aaKnown RBP9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 VIPP01282 170 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 FLT3P36888 993 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 EARS2Q5JPH6 523 aaKnown RBP9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 PPP1R26Q5T8A7 1209 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 RAD9BQ6WBX8 426 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 FAM228AQ86W67 206 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 GPSM1Q86YR5 675 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 CENPLQ8N0S6 344 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 CCDC185Q8N715 623 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 TUBGCP3Q96CW5 907 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 SPATA5L1Q9BVQ7 753 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 CDH19Q9H159 772 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 FANCFQ9NPI8 374 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 RBM12Q9NTZ6 932 aaKnown RBP9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 ETNK2Q9NVF9 386 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 GGT7Q9UJ14 662 aa9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 ZFP37Q9Y6Q3 630 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF9-204ENST00000615230 PPP1R11O60927 126 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 FGF18O76093 207 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms