RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 TBC1D3HP0C7X1 549 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 FAM228BP0C875 321 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 HTR7P34969 479 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 TPI1P60174 286 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 CNTN1Q12860 1018 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 SEMA3BQ13214 749 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 TRIM14Q14142 442 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 TEAD4Q15561 434 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 ERMARDQ5T6L9 678 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 TBC1D3GQ6DHY5 549 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 TBC1D3CQ6IPX1 549 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 TBC1D3Q8IZP1 549 aaPredicted RBP22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 ARFGAP1Q8N6T3 406 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 PCDH20Q8N6Y1 951 aaKnown RBP22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 CHST14Q8NCH0 376 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 TMIEQ8NEW7 156 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 NCAPGQ9BPX3 1015 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 DHX35Q9H5Z1 703 aaKnown RBP22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 TM9SF3Q9HD45 589 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 OSGEPQ9NPF4 335 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 FCF1Q9Y324 198 aaKnown RBP22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 SLCO1B1Q9Y6L6 691 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 EIF3CLB5ME19 914 aaKnown RBP22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 KPNA3O00505 521 aaPredicted RBP22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 KCNK5O95279 499 aa22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 CTSLP07711 333 aa22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 MIPP30301 263 aa22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 CSNK1EP49674 416 aaKnown RBP22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 CCR5P51681 352 aa22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 DPY19L3Q6ZPD9 716 aa22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 FAM131CQ96AQ9 280 aa22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 EIF3CQ99613 913 aaKnown RBP22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 THAP2Q9H0W7 228 aa22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 KDM4CQ9H3R0 1056 aa22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 DYRK4Q9NR20 520 aa22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 DONSONQ9NYP3 566 aa22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 ARHGAP20Q9P2F6 1191 aa22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 IL36AQ9UHA7 158 aa22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 TPX2Q9ULW0 747 aaKnown RBP22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 ACTL7AQ9Y615 435 aa22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 CHD5Q8TDI0 1954 aa22.32■■□□□ 1.16
PPFIA3-208ENST00000602726 A0A1B0GVT2 93 aa22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 A0A1W2PPC4 97 aa22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 WASH4PA8MWX3 477 aa22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 KDELR3O43731 214 aa22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 ZNF821O75541 412 aaPredicted RBP22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 TPM1P09493 284 aa22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 NOVA1P51513 510 aaKnown RBP22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 YBEYP58557 167 aaPredicted RBP22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 CCDC15Q0P6D6 951 aa22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 CARD16Q5EG05 197 aa22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 ARSIQ5FYB1 569 aa22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 CCDC122Q5T0U0 273 aa22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 PSAPL1Q6NUJ1 521 aa22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 ALKBH5Q6P6C2 394 aaKnown RBP22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 IL27RAQ6UWB1 636 aa22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 GRIN3AQ8TCU5 1115 aa22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 ISG20Q96AZ6 181 aaKnown RBP22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 PEBP4Q96S96 227 aa22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 SNRNP25Q9BV90 132 aaKnown RBP22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 NOL6Q9H6R4 1146 aaKnown RBP22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 DNAAF2Q9NVR5 837 aaKnown RBP22.31■■□□□ 1.16
PPFIA3-208ENST00000602726 ZSCAN5CA6NGD5 496 aaPredicted RBP22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 EEF2KO00418 725 aaKnown RBP22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 DAPK3O43293 454 aa22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 PLRG1O43660 514 aaKnown RBP22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 BUB1O43683 1085 aa22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 LRCH4O75427 683 aa22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 CD160O95971 181 aa22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 CSRP1P21291 193 aaKnown RBP22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 HNRNPH3P31942 346 aaKnown RBP22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 ACAP1Q15027 740 aa22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 CA9Q16790 459 aa22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 TSR1Q2NL82 804 aaKnown RBP22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 PARP15Q460N3 678 aa22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 AGBL4Q5VU57 503 aa22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 LEKR1Q6ZMV7 388 aa22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 ADAT2Q7Z6V5 191 aaKnown RBP22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 PSTKQ8IV42 348 aaKnown RBP22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 UMODL1-AS1Q8N2C9 162 aa22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 OR8K1Q8NGG5 319 aa22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 HEPHQ9BQS7 1158 aa22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 ORAI3Q9BRQ5 295 aa22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 TM6SF2Q9BZW4 377 aa22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 ZNHIT6Q9NWK9 470 aaKnown RBP22.3■■□□□ 1.16
PPFIA3-208ENST00000602726 RASA4BC9J798 803 aa22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 RASA4O43374 803 aa22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 LEFTY1O75610 366 aa22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 CER1O95813 267 aa22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 PCK1P35558 622 aa22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 EIF4A3P38919 411 aaKnown RBP22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 GRIA4P48058 902 aa22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 CCNHP51946 323 aaPredicted RBP22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 RACK1P63244 317 aaKnown RBP22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 BNC1Q01954 994 aa22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 PPP6R3Q5H9R7 873 aaPredicted RBP22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 VSTM4Q8IW00 320 aa22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 RYBPQ8N488 228 aaPredicted RBP22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 HMCESQ96FZ2 354 aa22.29■■□□□ 1.16
PPFIA3-208ENST00000602726 PPP1R16AQ96I34 528 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms