RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 CTSLP07711 333 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 RARAP10276 462 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 ERCC2P18074 760 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 MAOBP27338 520 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 CHRNA3P32297 505 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 DRD3P35462 400 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 NDST2P52849 883 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 METAP1P53582 386 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 IRX4P78413 519 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 SLC25A11Q02978 314 aaKnown RBP17.06■□□□□ 0.32
SSBP4-204ENST00000597724 SERINC3Q13530 473 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 DUOXA1Q1HG43 343 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 RSPO4Q2I0M5 234 aaPredicted RBP17.06■□□□□ 0.32
SSBP4-204ENST00000597724 SMTNL2Q2TAL5 461 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 TRIM61Q5EBN2 209 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 DCAF12L1Q5VU92 463 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 SLC23A3Q6PIS1 610 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 RABEPKQ7Z6M1 372 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 PCDH20Q8N6Y1 951 aaKnown RBP17.06■□□□□ 0.32
SSBP4-204ENST00000597724 TMIEQ8NEW7 156 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 CEP76Q8TAP6 659 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 PIP4K2CQ8TBX8 421 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 HSPH1Q92598 858 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 FAM131CQ96AQ9 280 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 RMDN1Q96DB5 314 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 HMCESQ96FZ2 354 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 KLC2Q9H0B6 622 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 LRRC19Q9H756 370 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 ZWILCHQ9H900 591 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 LCMT1Q9UIC8 334 aa17.06■□□□□ 0.32
SSBP4-204ENST00000597724 FCF1Q9Y324 198 aaKnown RBP17.06■□□□□ 0.32
SSBP4-204ENST00000597724 LNP1A1A4G5 178 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 MEI4A8MW99 385 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 C1QTNF3-AMACRE9PGA6 284 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 PROSCO94903 275 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 SDHBP21912 280 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 RECQLP46063 649 aaPredicted RBP17.05■□□□□ 0.32
SSBP4-204ENST00000597724 ID4P47928 161 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 DPYSQ14117 519 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 CARD16Q5EG05 197 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 LEKR1Q6ZMV7 388 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 DPY19L3Q6ZPD9 716 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 POLNQ7Z5Q5 900 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 ZNF354CQ86Y25 554 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 PLPP6Q8IY26 295 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 CHST14Q8NCH0 376 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 SLC35G2Q8TBE7 412 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 NETO1Q8TDF5 533 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 NUSAP1Q9BXS6 441 aaKnown RBP17.05■□□□□ 0.32
SSBP4-204ENST00000597724 OSGEPQ9NPF4 335 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.05■□□□□ 0.32
SSBP4-204ENST00000597724 DLL3Q9NYJ7 618 aa17.05■□□□□ 0.32
SSBP4-204ENST00000597724 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.05■□□□□ 0.32
SSBP4-204ENST00000597724 C10orf142B7Z368 130 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 H3BRJ5 948 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 BUB1O43683 1085 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 PRNPP04156 253 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 SERPINF2P08697 491 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 ARL4AP40617 200 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 DNA2P51530 1060 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 HADHQ16836 314 aaKnown RBP17.04■□□□□ 0.32
SSBP4-204ENST00000597724 INO80DQ53TQ3 878 aaPredicted RBP17.04■□□□□ 0.32
SSBP4-204ENST00000597724 AFMIDQ63HM1 303 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.04■□□□□ 0.32
SSBP4-204ENST00000597724 CPNE8Q86YQ8 564 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 OR2T34Q8NGX1 318 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 OR14C36Q8NHC7 312 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 C1orf216Q8TAB5 229 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 CASKIN2Q8WXE0 1202 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 BIRC7Q96CA5 298 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 CELF6Q96J87 481 aaKnown RBP17.04■□□□□ 0.32
SSBP4-204ENST00000597724 PANX2Q96RD6 677 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 ANP32EQ9BTT0 268 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 SLC39A8Q9C0K1 460 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 CAPN10Q9HC96 672 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 PCDH18Q9HCL0 1135 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 SUSD2Q9UGT4 822 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 IL36AQ9UHA7 158 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 EIF2B4Q9UI10 523 aaKnown RBP17.04■□□□□ 0.32
SSBP4-204ENST00000597724 CDV3Q9UKY7 258 aaKnown RBP17.04■□□□□ 0.32
SSBP4-204ENST00000597724 INTUQ9ULD6 942 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 SLC6A14Q9UN76 642 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 WASF2Q9Y6W5 498 aa17.04■□□□□ 0.32
SSBP4-204ENST00000597724 ARHGAP42A6NI28 874 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 LRRC72A6NJI9 287 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 RNF103O00237 685 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 PLK4O00444 970 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 MTA2O94776 668 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 LCA5LO95447 670 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 CFIP05156 583 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 GNSP15586 552 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 SSR1P43307 286 aaKnown RBP17.03■□□□□ 0.32
SSBP4-204ENST00000597724 PAPOLAP51003 745 aaKnown RBP17.03■□□□□ 0.32
SSBP4-204ENST00000597724 CCNHP51946 323 aaPredicted RBP17.03■□□□□ 0.32
SSBP4-204ENST00000597724 LIMK1P53667 647 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 CNTN1Q12860 1018 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 POM121L1PQ3SYA9 428 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 ARSIQ5FYB1 569 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 NCEH1Q6PIU2 408 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 ARHGAP12Q8IWW6 846 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms