RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 C1QTNF3-AMACRE9PGA6 284 aa21.51■■□□□ 1.03
PNKP-209ENST00000596726 EEF2KO00418 725 aaKnown RBP21.51■■□□□ 1.03
PNKP-209ENST00000596726 AKR1B10O60218 316 aa21.51■■□□□ 1.03
PNKP-209ENST00000596726 CTSLP07711 333 aa21.51■■□□□ 1.03
PNKP-209ENST00000596726 SERPINF2P08697 491 aa21.51■■□□□ 1.03
PNKP-209ENST00000596726 CHRNA3P32297 505 aa21.51■■□□□ 1.03
PNKP-209ENST00000596726 HCAR3P49019 387 aa21.51■■□□□ 1.03
PNKP-209ENST00000596726 ZNF135P52742 658 aaPredicted RBP21.51■■□□□ 1.03
PNKP-209ENST00000596726 GEMIN4P57678 1058 aaKnown RBP21.51■■□□□ 1.03
PNKP-209ENST00000596726 BOLA3Q53S33 107 aa21.51■■□□□ 1.03
PNKP-209ENST00000596726 STPG1Q5TH74 334 aa21.51■■□□□ 1.03
PNKP-209ENST00000596726 TMIEQ8NEW7 156 aa21.51■■□□□ 1.03
PNKP-209ENST00000596726 NUSAP1Q9BXS6 441 aaKnown RBP21.51■■□□□ 1.03
PNKP-209ENST00000596726 TNKS2Q9H2K2 1166 aa21.51■■□□□ 1.03
PNKP-209ENST00000596726 LRRC19Q9H756 370 aa21.51■■□□□ 1.03
PNKP-209ENST00000596726 DONSONQ9NYP3 566 aa21.51■■□□□ 1.03
PNKP-209ENST00000596726 UVRAGQ9P2Y5 699 aa21.51■■□□□ 1.03
PNKP-209ENST00000596726 SUSD2Q9UGT4 822 aa21.51■■□□□ 1.03
PNKP-209ENST00000596726 FARP1Q9Y4F1 1045 aaPredicted RBP21.51■■□□□ 1.03
PNKP-209ENST00000596726 DNAH14Q0VDD8 3507 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 ZSCAN5CA6NGD5 496 aaPredicted RBP21.5■■□□□ 1.03
PNKP-209ENST00000596726 RASA4BC9J798 803 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 MYO1FO00160 1098 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 CDX4O14627 284 aaPredicted RBP21.5■■□□□ 1.03
PNKP-209ENST00000596726 RASA4O43374 803 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 BNIP3LO60238 219 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 H2AFZP0C0S5 128 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 SLC25A11Q02978 314 aaKnown RBP21.5■■□□□ 1.03
PNKP-209ENST00000596726 DPYSL2Q16555 572 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 PARP15Q460N3 678 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 DPY19L3Q6ZPD9 716 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 RFX8Q6ZV50 586 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 H2AFVQ71UI9 128 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 PLPP6Q8IY26 295 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 TC2NQ8N9U0 490 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 CHST14Q8NCH0 376 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 OR2T34Q8NGX1 318 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 ZNF564Q8TBZ8 553 aaPredicted RBP21.5■■□□□ 1.03
PNKP-209ENST00000596726 CTNNBL1Q8WYA6 563 aaPredicted RBP21.5■■□□□ 1.03
PNKP-209ENST00000596726 BIRC7Q96CA5 298 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 HMCESQ96FZ2 354 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 CCDC42Q96M95 316 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 KLC2Q9H0B6 622 aa21.5■■□□□ 1.03
PNKP-209ENST00000596726 EIF2B4Q9UI10 523 aaKnown RBP21.5■■□□□ 1.03
PNKP-209ENST00000596726 FCF1Q9Y324 198 aaKnown RBP21.5■■□□□ 1.03
PNKP-209ENST00000596726 A0A1B0GTW7 788 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 TM4SF5O14894 197 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 SLC7A4O43246 635 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 CFIP05156 583 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 IGHV4-34P06331 123 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 TMEM253P0C7T8 217 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 RARAP10276 462 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 GNSP15586 552 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 ERCC2P18074 760 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 ZNF75DP51815 510 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 NDST2P52849 883 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 ADPRHP54922 357 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 SERINC3Q13530 473 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 CARD16Q5EG05 197 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 PPP6R3Q5H9R7 873 aaPredicted RBP21.49■■□□□ 1.03
PNKP-209ENST00000596726 KCNT1Q5JUK3 1230 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 KIAA0895LQ68EN5 471 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 TXNRD3NBQ6F5E7 133 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 NCEH1Q6PIU2 408 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 TEKT4Q8WW24 435 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 MRFAP1L1Q96HT8 127 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 ORAI3Q9BRQ5 295 aa21.49■■□□□ 1.03
PNKP-209ENST00000596726 CWC15Q9P013 229 aaKnown RBP21.49■■□□□ 1.03
PNKP-209ENST00000596726 DOCK9Q9BZ29 2069 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 PLXNA2O75051 1894 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 LRRC72A6NJI9 287 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 RNF103O00237 685 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 PLK4O00444 970 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 PRNPP04156 253 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 ENGP17813 658 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 RECQLP46063 649 aaPredicted RBP21.48■■□□□ 1.03
PNKP-209ENST00000596726 CNTN1Q12860 1018 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 DPYSQ14117 519 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 SMTNL2Q2TAL5 461 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 AFMIDQ63HM1 303 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.48■■□□□ 1.03
PNKP-209ENST00000596726 ZCCHC9Q8N567 271 aaKnown RBP21.48■■□□□ 1.03
PNKP-209ENST00000596726 SLC39A8Q9C0K1 460 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 KDM4CQ9H3R0 1056 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 ZWILCHQ9H900 591 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 FSCN3Q9NQT6 498 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 SPTLC3Q9NUV7 552 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 CTTNBP2NLQ9P2B4 639 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 IL36AQ9UHA7 158 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 WASF2Q9Y6W5 498 aa21.48■■□□□ 1.03
PNKP-209ENST00000596726 ASCC3Q8N3C0 2202 aaKnown RBP21.47■■□□□ 1.03
PNKP-209ENST00000596726 BCAT2O15382 392 aaPredicted RBP21.47■■□□□ 1.03
PNKP-209ENST00000596726 PROSCO94903 275 aa21.47■■□□□ 1.03
PNKP-209ENST00000596726 FSBPO95073 299 aa21.47■■□□□ 1.03
PNKP-209ENST00000596726 INO80DQ53TQ3 878 aaPredicted RBP21.47■■□□□ 1.03
PNKP-209ENST00000596726 ARSIQ5FYB1 569 aa21.47■■□□□ 1.03
PNKP-209ENST00000596726 AGBL4Q5VU57 503 aa21.47■■□□□ 1.03
PNKP-209ENST00000596726 LEKR1Q6ZMV7 388 aa21.47■■□□□ 1.03
PNKP-209ENST00000596726 POLNQ7Z5Q5 900 aa21.47■■□□□ 1.03
PNKP-209ENST00000596726 ARHGAP12Q8IWW6 846 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms