RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 C11orf74Q86VG3 221 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 MFN1Q8IWA4 741 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 MNS1Q8NEH6 495 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 SPATA4Q8NEY3 305 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 LMLNQ96KR4 655 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 SLC39A8Q9C0K1 460 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 MAGEH1Q9H213 219 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 RXFP3Q9NSD7 469 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 HEY1Q9Y5J3 304 aa16.95■□□□□ 0.3
GCDH-213ENST00000590627 HACD1B0YJ81 288 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 RASA4BC9J798 803 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 H0Y626 953 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 RASA4O43374 803 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 LIASO43766 372 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 RHOCP08134 193 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 ETFBP38117 255 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 OPRD1P41143 372 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 GNA12Q03113 381 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 ZNF33AQ06730 810 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 CDH18Q13634 790 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 POLD3Q15054 466 aaPredicted RBP16.94■□□□□ 0.3
GCDH-213ENST00000590627 GAB4Q2WGN9 574 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 ANO4Q32M45 955 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 CCDC117Q8IWD4 279 aaPredicted RBP16.94■□□□□ 0.3
GCDH-213ENST00000590627 ETFBKMTQ8IXQ9 262 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 CARNMT1Q8N4J0 409 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 CEP112Q8N8E3 955 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 TSTD1Q8NFU3 115 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 USP33Q8TEY7 942 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 C1orf54Q8WWF1 131 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 BHMTQ93088 406 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 HAUS1Q96CS2 278 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 CELF6Q96J87 481 aaKnown RBP16.94■□□□□ 0.3
GCDH-213ENST00000590627 TSGA13Q96PP4 275 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 PLK2Q9NYY3 685 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 KIAA1522Q9P206 1035 aaPredicted RBP16.94■□□□□ 0.3
GCDH-213ENST00000590627 CLEC4EQ9ULY5 219 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 DRG1Q9Y295 367 aaKnown RBP16.94■□□□□ 0.3
GCDH-213ENST00000590627 OR51B4Q9Y5P0 310 aa16.94■□□□□ 0.3
GCDH-213ENST00000590627 ARHGAP42A6NI28 874 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 MCF2LO15068 1137 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 PHF2O75151 1096 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 ZNF189O75820 626 aaPredicted RBP16.93■□□□□ 0.3
GCDH-213ENST00000590627 CHRNA3P32297 505 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 GARSP41250 739 aaKnown RBP16.93■□□□□ 0.3
GCDH-213ENST00000590627 FNTAP49354 379 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 DGKEP52429 567 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 PLK1P53350 603 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 EIF3EP60228 445 aaKnown RBP16.93■□□□□ 0.3
GCDH-213ENST00000590627 SLC12A1Q13621 1099 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 OASLQ15646 514 aaKnown RBP16.93■□□□□ 0.3
GCDH-213ENST00000590627 USP39Q53GS9 565 aaKnown RBP16.93■□□□□ 0.3
GCDH-213ENST00000590627 FSCBQ5H9T9 825 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 RASSF3Q86WH2 238 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 TP53INP2Q8IXH6 220 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.93■□□□□ 0.3
GCDH-213ENST00000590627 OR52K2Q8NGK3 314 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 WFDC5Q8TCV5 224 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 ATG4AQ8WYN0 398 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 ARHGEF2Q92974 986 aaKnown RBP16.93■□□□□ 0.3
GCDH-213ENST00000590627 FATE1Q969F0 183 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 HDAC11Q96DB2 347 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 ALG14Q96F25 216 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 XPO6Q96QU8 1125 aaKnown RBP16.93■□□□□ 0.3
GCDH-213ENST00000590627 ACE2Q9BYF1 805 aaPredicted RBP16.93■□□□□ 0.3
GCDH-213ENST00000590627 LAMA1P25391 3075 aa16.93■□□□□ 0.3
GCDH-213ENST00000590627 BCLAF3A2AJT9 711 aaKnown RBP16.92■□□□□ 0.3
GCDH-213ENST00000590627 CTAGE15A4D2H0 777 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 K7EQS6 105 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 PPP1R12AO14974 1030 aaPredicted RBP16.92■□□□□ 0.3
GCDH-213ENST00000590627 KRT37O76014 449 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 ITGAVP06756 1048 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 CISD3P0C7P0 127 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 CTAGE8P0CG41 777 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 RBP3P10745 1247 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 KCNA4P22459 653 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 PMLP29590 882 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 EIF2DP41214 584 aaKnown RBP16.92■□□□□ 0.3
GCDH-213ENST00000590627 PAPOLAP51003 745 aaKnown RBP16.92■□□□□ 0.3
GCDH-213ENST00000590627 MRPS21P82921 87 aaKnown RBP16.92■□□□□ 0.3
GCDH-213ENST00000590627 PPIDQ08752 370 aaKnown RBP16.92■□□□□ 0.3
GCDH-213ENST00000590627 SERINC3Q13530 473 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 BYSLQ13895 437 aaKnown RBP16.92■□□□□ 0.3
GCDH-213ENST00000590627 PRKD1Q15139 912 aaPredicted RBP16.92■□□□□ 0.3
GCDH-213ENST00000590627 ST3GAL2Q16842 350 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 SLC45A4Q5BKX6 768 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 KIAA0907Q7Z7F0 614 aaPredicted RBP16.92■□□□□ 0.3
GCDH-213ENST00000590627 CTAGE6Q86UF2 777 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 CTAGE4Q8IX94 777 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 TFB1MQ8WVM0 346 aaKnown RBP16.92■□□□□ 0.3
GCDH-213ENST00000590627 MAGOHBQ96A72 148 aaKnown RBP16.92■□□□□ 0.3
GCDH-213ENST00000590627 HMCESQ96FZ2 354 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 QKIQ96PU8 341 aaKnown RBP eCLIP16.92■□□□□ 0.3
GCDH-213ENST00000590627 FEM1AQ9BSK4 669 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 SMOC1Q9H4F8 434 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 ANGPTL2Q9UKU9 493 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 DNPEPQ9ULA0 475 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 MMP17Q9ULZ9 603 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 SLC27A6Q9Y2P4 619 aa16.92■□□□□ 0.3
GCDH-213ENST00000590627 USP24Q9UPU5 2620 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms