RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 ANGPT1Q15389 498 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 HS1BP3Q53T59 392 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 INO80DQ53TQ3 878 aaPredicted RBP19.5■□□□□ 0.71
DDX39A-214ENST00000590556 SEL1L2Q5TEA6 688 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 TSSK4Q6SA08 328 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 Q6ZVU0 165 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 BZW1Q7L1Q6 419 aaKnown RBP19.5■□□□□ 0.71
DDX39A-214ENST00000590556 CCNYQ8ND76 341 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 HMGB4Q8WW32 186 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 P3H4Q92791 437 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 PTPRN2Q92932 1015 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 ISG20Q96AZ6 181 aaKnown RBP19.5■□□□□ 0.71
DDX39A-214ENST00000590556 ZNF599Q96NL3 588 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 HERPUD2Q9BSE4 406 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 TNKS2Q9H2K2 1166 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 FBRSQ9HAH7 460 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 BCCIPQ9P287 314 aaKnown RBP eCLIP19.5■□□□□ 0.71
DDX39A-214ENST00000590556 SHROOM3Q8TF72 1996 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 ENC1O14682 589 aa19.49■□□□□ 0.71
DDX39A-214ENST00000590556 TMCC1O94876 653 aa19.49■□□□□ 0.71
DDX39A-214ENST00000590556 HOXA6P31267 233 aa19.49■□□□□ 0.71
DDX39A-214ENST00000590556 RECQLP46063 649 aaPredicted RBP19.49■□□□□ 0.71
DDX39A-214ENST00000590556 ANO7Q6IWH7 933 aa19.49■□□□□ 0.71
DDX39A-214ENST00000590556 PGBD3Q8N328 593 aa19.49■□□□□ 0.71
DDX39A-214ENST00000590556 C17orf53Q8N3J3 647 aaPredicted RBP19.49■□□□□ 0.71
DDX39A-214ENST00000590556 PCDH20Q8N6Y1 951 aaKnown RBP19.49■□□□□ 0.71
DDX39A-214ENST00000590556 OR2T3Q8NH03 318 aa19.49■□□□□ 0.71
DDX39A-214ENST00000590556 NSMCE1Q8WV22 266 aa19.49■□□□□ 0.71
DDX39A-214ENST00000590556 HAUS1Q96CS2 278 aa19.49■□□□□ 0.71
DDX39A-214ENST00000590556 CCDC114Q96M63 670 aa19.49■□□□□ 0.71
DDX39A-214ENST00000590556 TSGA13Q96PP4 275 aa19.49■□□□□ 0.71
DDX39A-214ENST00000590556 CARD9Q9H257 536 aa19.49■□□□□ 0.71
DDX39A-214ENST00000590556 SAE1Q9UBE0 346 aaPredicted RBP19.49■□□□□ 0.71
DDX39A-214ENST00000590556 PPP1R12AO14974 1030 aaPredicted RBP19.48■□□□□ 0.71
DDX39A-214ENST00000590556 RNASEH1O60930 286 aaKnown RBP19.48■□□□□ 0.71
DDX39A-214ENST00000590556 ZNF821O75541 412 aaPredicted RBP19.48■□□□□ 0.71
DDX39A-214ENST00000590556 TDGF1P13385 188 aa19.48■□□□□ 0.71
DDX39A-214ENST00000590556 PECAM1P16284 738 aaPredicted RBP19.48■□□□□ 0.71
DDX39A-214ENST00000590556 GABRG2P18507 467 aa19.48■□□□□ 0.71
DDX39A-214ENST00000590556 CCNCP24863 283 aa19.48■□□□□ 0.71
DDX39A-214ENST00000590556 PXNP49023 591 aaPredicted RBP19.48■□□□□ 0.71
DDX39A-214ENST00000590556 RHOAP61586 193 aa19.48■□□□□ 0.71
DDX39A-214ENST00000590556 GNG11P61952 73 aa19.48■□□□□ 0.71
DDX39A-214ENST00000590556 RFTN1Q14699 578 aaPredicted RBP19.48■□□□□ 0.71
DDX39A-214ENST00000590556 CYTH1Q15438 398 aa19.48■□□□□ 0.71
DDX39A-214ENST00000590556 CARD16Q5EG05 197 aa19.48■□□□□ 0.71
DDX39A-214ENST00000590556 TMCO4Q5TGY1 634 aa19.48■□□□□ 0.71
DDX39A-214ENST00000590556 HEATR6Q6AI08 1181 aaKnown RBP19.48■□□□□ 0.71
DDX39A-214ENST00000590556 TIGD7Q6NT04 549 aaPredicted RBP19.48■□□□□ 0.71
DDX39A-214ENST00000590556 STK40Q8N2I9 435 aa19.48■□□□□ 0.71
DDX39A-214ENST00000590556 HDAC11Q96DB2 347 aa19.48■□□□□ 0.71
DDX39A-214ENST00000590556 OLFM3Q96PB7 478 aa19.48■□□□□ 0.71
DDX39A-214ENST00000590556 PRRX2Q99811 253 aa19.48■□□□□ 0.71
DDX39A-214ENST00000590556 BRD8Q9H0E9 1235 aa19.48■□□□□ 0.71
DDX39A-214ENST00000590556 FARP1Q9Y4F1 1045 aaPredicted RBP19.48■□□□□ 0.71
DDX39A-214ENST00000590556 APOC4-APOC2K7ER74 178 aa19.47■□□□□ 0.71
DDX39A-214ENST00000590556 PEX11BO96011 259 aa19.47■□□□□ 0.71
DDX39A-214ENST00000590556 APOC2P02655 101 aa19.47■□□□□ 0.71
DDX39A-214ENST00000590556 COPAP53621 1224 aa19.47■□□□□ 0.71
DDX39A-214ENST00000590556 NRLP54845 237 aa19.47■□□□□ 0.71
DDX39A-214ENST00000590556 ELAVL3Q14576 367 aaKnown RBP19.47■□□□□ 0.71
DDX39A-214ENST00000590556 LBRQ14739 615 aaKnown RBP19.47■□□□□ 0.71
DDX39A-214ENST00000590556 TMPRSS6Q8IU80 811 aa19.47■□□□□ 0.71
DDX39A-214ENST00000590556 MDGA1Q8NFP4 955 aa19.47■□□□□ 0.71
DDX39A-214ENST00000590556 OR2A12Q8NGT7 310 aa19.47■□□□□ 0.71
DDX39A-214ENST00000590556 LRRN4Q8WUT4 740 aa19.47■□□□□ 0.71
DDX39A-214ENST00000590556 OR8D1Q8WZ84 308 aa19.47■□□□□ 0.71
DDX39A-214ENST00000590556 MRGPRX1Q96LB2 322 aa19.47■□□□□ 0.71
DDX39A-214ENST00000590556 FAM129BQ96TA1 746 aa19.47■□□□□ 0.71
DDX39A-214ENST00000590556 LGMNQ99538 433 aa19.47■□□□□ 0.71
DDX39A-214ENST00000590556 CINPQ9BW66 212 aaPredicted RBP19.47■□□□□ 0.71
DDX39A-214ENST00000590556 TM6SF2Q9BZW4 377 aa19.47■□□□□ 0.71
DDX39A-214ENST00000590556 MKRN2Q9H000 416 aaKnown RBP19.47■□□□□ 0.71
DDX39A-214ENST00000590556 SLC6A17Q9H1V8 727 aa19.47■□□□□ 0.71
DDX39A-214ENST00000590556 RSPH9Q9H1X1 276 aaPredicted RBP19.47■□□□□ 0.71
DDX39A-214ENST00000590556 SEPT3Q9UH03 358 aa19.47■□□□□ 0.71
DDX39A-214ENST00000590556 EBF1Q9UH73 591 aa19.47■□□□□ 0.71
DDX39A-214ENST00000590556 MCF2LO15068 1137 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 MATN3O15232 486 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 GSRP00390 522 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 SP9P0CG40 484 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 NDUFV2P19404 249 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 FNTBP49356 437 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 SNRPD1P62314 119 aaKnown RBP19.46■□□□□ 0.71
DDX39A-214ENST00000590556 PPIDQ08752 370 aaKnown RBP19.46■□□□□ 0.71
DDX39A-214ENST00000590556 DMWDQ09019 674 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 SLC10A7Q0GE19 358 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 AP1B1Q10567 949 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 ZNF528Q3MIS6 628 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 MARC1Q5VT66 337 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 ZNF776Q68DI1 518 aaPredicted RBP19.46■□□□□ 0.71
DDX39A-214ENST00000590556 KIAA1324Q6UXG2 1013 aaKnown RBP19.46■□□□□ 0.71
DDX39A-214ENST00000590556 DPY19L3Q6ZPD9 716 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 DSG4Q86SJ6 1040 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 RASSF3Q86WH2 238 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 PLPP6Q8IY26 295 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 CCDC13Q8IYE1 715 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 BBS5Q8N3I7 341 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 RYBPQ8N488 228 aaPredicted RBP19.46■□□□□ 0.71
DDX39A-214ENST00000590556 PRCCQ92733 491 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms