RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 SLC6A18Q96N87 628 aa21.8■■□□□ 1.08
LRP3-202ENST00000590275 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.8■■□□□ 1.08
LRP3-202ENST00000590275 DNAAF2Q9NVR5 837 aaKnown RBP21.8■■□□□ 1.08
LRP3-202ENST00000590275 LUC7L2Q9Y383 392 aaKnown RBP21.8■■□□□ 1.08
LRP3-202ENST00000590275 PI4KAP42356 2102 aa21.8■■□□□ 1.08
LRP3-202ENST00000590275 WASH4PA8MWX3 477 aa21.79■■□□□ 1.08
LRP3-202ENST00000590275 ALOX15BO15296 676 aa21.79■■□□□ 1.08
LRP3-202ENST00000590275 HNRNPH3P31942 346 aaKnown RBP21.79■■□□□ 1.08
LRP3-202ENST00000590275 CLCN6P51797 869 aa21.79■■□□□ 1.08
LRP3-202ENST00000590275 KIF19Q2TAC6 998 aa21.79■■□□□ 1.08
LRP3-202ENST00000590275 ARSIQ5FYB1 569 aa21.79■■□□□ 1.08
LRP3-202ENST00000590275 TXNRD3NBQ6F5E7 133 aa21.79■■□□□ 1.08
LRP3-202ENST00000590275 PPP1R2P3Q6NXS1 205 aa21.79■■□□□ 1.08
LRP3-202ENST00000590275 FNIP1Q8TF40 1166 aa21.79■■□□□ 1.08
LRP3-202ENST00000590275 CAMK1GQ96NX5 476 aa21.79■■□□□ 1.08
LRP3-202ENST00000590275 MAGEH1Q9H213 219 aa21.79■■□□□ 1.08
LRP3-202ENST00000590275 AP4E1Q9UPM8 1137 aa21.79■■□□□ 1.08
LRP3-202ENST00000590275 A0A1W2PPC4 97 aa21.78■■□□□ 1.08
LRP3-202ENST00000590275 KCNK3O14649 394 aa21.78■■□□□ 1.08
LRP3-202ENST00000590275 PLRG1O43660 514 aaKnown RBP21.78■■□□□ 1.08
LRP3-202ENST00000590275 RAMP2O60895 175 aa21.78■■□□□ 1.08
LRP3-202ENST00000590275 ADRB1P08588 477 aa21.78■■□□□ 1.08
LRP3-202ENST00000590275 FAM193AP78312 1265 aa21.78■■□□□ 1.08
LRP3-202ENST00000590275 POLD3Q15054 466 aaPredicted RBP21.78■■□□□ 1.08
LRP3-202ENST00000590275 RETSATQ6NUM9 610 aa21.78■■□□□ 1.08
LRP3-202ENST00000590275 OR6K2Q8NGY2 324 aa21.78■■□□□ 1.08
LRP3-202ENST00000590275 GRIN3AQ8TCU5 1115 aa21.78■■□□□ 1.08
LRP3-202ENST00000590275 TM6SF2Q9BZW4 377 aa21.78■■□□□ 1.08
LRP3-202ENST00000590275 DHX35Q9H5Z1 703 aaKnown RBP21.78■■□□□ 1.08
LRP3-202ENST00000590275 RETREG1Q9H6L5 497 aa21.78■■□□□ 1.08
LRP3-202ENST00000590275 OSGEPQ9NPF4 335 aa21.78■■□□□ 1.08
LRP3-202ENST00000590275 FNDC3AQ9Y2H6 1198 aaKnown RBP21.78■■□□□ 1.08
LRP3-202ENST00000590275 MFHAS1Q9Y4C4 1052 aa21.78■■□□□ 1.08
LRP3-202ENST00000590275 SNX11Q9Y5W9 270 aa21.78■■□□□ 1.08
LRP3-202ENST00000590275 BZW2Q9Y6E2 419 aaKnown RBP21.78■■□□□ 1.08
LRP3-202ENST00000590275 LATO43561 262 aa21.77■■□□□ 1.08
LRP3-202ENST00000590275 KDELR3O43731 214 aa21.77■■□□□ 1.08
LRP3-202ENST00000590275 LEFTY1O75610 366 aa21.77■■□□□ 1.08
LRP3-202ENST00000590275 SYPP08247 313 aa21.77■■□□□ 1.08
LRP3-202ENST00000590275 EIF4A3P38919 411 aaKnown RBP21.77■■□□□ 1.08
LRP3-202ENST00000590275 NOVA1P51513 510 aaKnown RBP21.77■■□□□ 1.08
LRP3-202ENST00000590275 AIF1P55008 147 aa21.77■■□□□ 1.08
LRP3-202ENST00000590275 ASTE1Q2TB18 679 aaPredicted RBP21.77■■□□□ 1.08
LRP3-202ENST00000590275 VSTM4Q8IW00 320 aa21.77■■□□□ 1.08
LRP3-202ENST00000590275 TP53INP2Q8IXH6 220 aa21.77■■□□□ 1.08
LRP3-202ENST00000590275 TMIEQ8NEW7 156 aa21.77■■□□□ 1.08
LRP3-202ENST00000590275 PACSIN1Q9BY11 444 aa21.77■■□□□ 1.08
LRP3-202ENST00000590275 CEP44Q9C0F1 390 aa21.77■■□□□ 1.08
LRP3-202ENST00000590275 LRRC19Q9H756 370 aa21.77■■□□□ 1.08
LRP3-202ENST00000590275 ASCC3Q8N3C0 2202 aaKnown RBP21.77■■□□□ 1.08
LRP3-202ENST00000590275 CNOT1A5YKK6 2376 aaKnown RBP21.76■■□□□ 1.07
LRP3-202ENST00000590275 A0A1W2PR77 199 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 LRRC72A6NJI9 287 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 RASA4BC9J798 803 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 C1QTNF3-AMACRE9PGA6 284 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 KPNA3O00505 521 aaPredicted RBP21.76■■□□□ 1.07
LRP3-202ENST00000590275 RASA4O43374 803 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 CYP1A2P05177 515 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 MYBL1P10243 752 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 CCR5P51681 352 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 CCNHP51946 323 aaPredicted RBP21.76■■□□□ 1.07
LRP3-202ENST00000590275 ATXN3P54252 364 aaPredicted RBP21.76■■□□□ 1.07
LRP3-202ENST00000590275 SLC20A2Q08357 652 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 HLA-BQ31612 363 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 CARD16Q5EG05 197 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 ATXN7L2Q5T6C5 722 aaPredicted RBP21.76■■□□□ 1.07
LRP3-202ENST00000590275 ERMARDQ5T6L9 678 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 FAM46CQ5VWP2 391 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 DSG4Q86SJ6 1040 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 UMODL1-AS1Q8N2C9 162 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 PCDH20Q8N6Y1 951 aaKnown RBP21.76■■□□□ 1.07
LRP3-202ENST00000590275 CELF6Q96J87 481 aaKnown RBP21.76■■□□□ 1.07
LRP3-202ENST00000590275 DNAJC7Q99615 494 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 EPAS1Q99814 870 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 IL36AQ9UHA7 158 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 ANKRD6Q9Y2G4 727 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 CHD5Q8TDI0 1954 aa21.76■■□□□ 1.07
LRP3-202ENST00000590275 CACNA1EQ15878 2313 aa21.75■■□□□ 1.07
LRP3-202ENST00000590275 TBC1D3DA0A087WVF3 549 aa21.75■■□□□ 1.07
LRP3-202ENST00000590275 TBC1D3IA0A087WXS9 549 aa21.75■■□□□ 1.07
LRP3-202ENST00000590275 TBC1D3EA0A087X179 549 aa21.75■■□□□ 1.07
LRP3-202ENST00000590275 TBC1D3KA0A087X1G2 549 aa21.75■■□□□ 1.07
LRP3-202ENST00000590275 TBC1D3FA6NER0 549 aaPredicted RBP21.75■■□□□ 1.07
LRP3-202ENST00000590275 TBC1D3LB9A6J9 549 aa21.75■■□□□ 1.07
LRP3-202ENST00000590275 OPHN1O60890 802 aa21.75■■□□□ 1.07
LRP3-202ENST00000590275 TBC1D3HP0C7X1 549 aa21.75■■□□□ 1.07
LRP3-202ENST00000590275 CSRP1P21291 193 aaKnown RBP21.75■■□□□ 1.07
LRP3-202ENST00000590275 MAT2AP31153 395 aaKnown RBP21.75■■□□□ 1.07
LRP3-202ENST00000590275 DNA2P51530 1060 aa21.75■■□□□ 1.07
LRP3-202ENST00000590275 AFF3P51826 1226 aaKnown RBP21.75■■□□□ 1.07
LRP3-202ENST00000590275 TPI1P60174 286 aa21.75■■□□□ 1.07
LRP3-202ENST00000590275 SERINC3Q13530 473 aa21.75■■□□□ 1.07
LRP3-202ENST00000590275 CCDC122Q5T0U0 273 aa21.75■■□□□ 1.07
LRP3-202ENST00000590275 SPECC1LQ69YQ0 1117 aa21.75■■□□□ 1.07
LRP3-202ENST00000590275 TBC1D3GQ6DHY5 549 aa21.75■■□□□ 1.07
LRP3-202ENST00000590275 TBC1D3CQ6IPX1 549 aa21.75■■□□□ 1.07
LRP3-202ENST00000590275 ALKBH5Q6P6C2 394 aaKnown RBP21.75■■□□□ 1.07
LRP3-202ENST00000590275 ARHGAP12Q8IWW6 846 aa21.75■■□□□ 1.07
LRP3-202ENST00000590275 TBC1D3Q8IZP1 549 aaPredicted RBP21.75■■□□□ 1.07
LRP3-202ENST00000590275 NPWQ8N729 165 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms