RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 URI1O94763 535 aaPredicted RBP13.87□□□□□ -0.19
VMP1-210ENST00000589823 TMCC1O94876 653 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 EPHX1P07099 455 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 DCNP07585 359 aaKnown RBP13.87□□□□□ -0.19
VMP1-210ENST00000589823 AOC1P19801 751 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 CLCN5P51795 746 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 FZD5Q13467 585 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 HNRNPDQ14103 355 aaKnown RBP13.87□□□□□ -0.19
VMP1-210ENST00000589823 ZNF235Q14590 738 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 STARD3Q14849 445 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 PRKD1Q15139 912 aaPredicted RBP13.87□□□□□ -0.19
VMP1-210ENST00000589823 SLC45A4Q5BKX6 768 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 MARC1Q5VT66 337 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 HEATR6Q6AI08 1181 aaKnown RBP13.87□□□□□ -0.19
VMP1-210ENST00000589823 C22orf39Q6P5X5 142 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 PCDH20Q8N6Y1 951 aaKnown RBP13.87□□□□□ -0.19
VMP1-210ENST00000589823 TXNDC5Q8NBS9 432 aaKnown RBP13.87□□□□□ -0.19
VMP1-210ENST00000589823 LRRN4Q8WUT4 740 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 PBXIP1Q96AQ6 731 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 MYO19Q96H55 970 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 CCDC114Q96M63 670 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 ACOX2Q99424 681 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 IER2Q9BTL4 223 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 CHRDQ9H2X0 955 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 TMEM245Q9H330 911 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 SEPT10Q9P0V9 454 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 SEPT3Q9UH03 358 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 MMP17Q9ULZ9 603 aa13.87□□□□□ -0.19
VMP1-210ENST00000589823 FCF1Q9Y324 198 aaKnown RBP13.87□□□□□ -0.19
VMP1-210ENST00000589823 FARP1Q9Y4F1 1045 aaPredicted RBP13.87□□□□□ -0.19
VMP1-210ENST00000589823 NCOR1O75376 2440 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 EDDM13A0A1B0GTR0 161 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 WASH3PC4AMC7 463 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 KCNK1O00180 336 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 KRIT1O00522 736 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 SMAD6O43541 496 aaKnown RBP13.86□□□□□ -0.19
VMP1-210ENST00000589823 LIASO43766 372 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 SYNCRIPO60506 623 aaKnown RBP13.86□□□□□ -0.19
VMP1-210ENST00000589823 CD160O95971 181 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 HLA-EP13747 358 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 CCNB1P14635 433 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 HOXB2P14652 356 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 PRKCHP24723 683 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 RECQLP46063 649 aaPredicted RBP13.86□□□□□ -0.19
VMP1-210ENST00000589823 RHOAP61586 193 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 ENPP2Q13822 863 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 BYSLQ13895 437 aaKnown RBP13.86□□□□□ -0.19
VMP1-210ENST00000589823 CYTH1Q15438 398 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 CCNG2Q16589 344 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 HNRNPA1L2Q32P51 320 aaKnown RBP13.86□□□□□ -0.19
VMP1-210ENST00000589823 B4GALNT4Q76KP1 1039 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 BMP8AQ7Z5Y6 402 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 CREG2Q8IUH2 290 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 ZNF366Q8N895 744 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 FRS2Q8WU20 508 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 C1orf54Q8WWF1 131 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 ATG4AQ8WYN0 398 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 MAML1Q92585 1016 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 ISG20Q96AZ6 181 aaKnown RBP13.86□□□□□ -0.19
VMP1-210ENST00000589823 GABRG3Q99928 467 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 AP1M1Q9BXS5 423 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 EPHX3Q9H6B9 360 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 SMARCAL1Q9NZC9 954 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 NYNRINQ9P2P1 1898 aaKnown RBP13.86□□□□□ -0.19
VMP1-210ENST00000589823 NUP205Q92621 2012 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 BDP1A6H8Y1 2624 aa13.86□□□□□ -0.19
VMP1-210ENST00000589823 BCLAF3A2AJT9 711 aaKnown RBP13.85□□□□□ -0.19
VMP1-210ENST00000589823 TARSL2A2RTX5 802 aaKnown RBP13.85□□□□□ -0.19
VMP1-210ENST00000589823 CFAP69A5D8W1 941 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 SGK1O00141 431 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 BNIP3LO60238 219 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 ZNF500O60304 480 aaPredicted RBP13.85□□□□□ -0.19
VMP1-210ENST00000589823 STK10O94804 968 aaKnown RBP13.85□□□□□ -0.19
VMP1-210ENST00000589823 PEX11BO96011 259 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 JCHAINP01591 159 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 CHRM1P11229 460 aaPredicted RBP13.85□□□□□ -0.19
VMP1-210ENST00000589823 VAV1P15498 845 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 RBL1P28749 1068 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 HSPA9P38646 679 aaKnown RBP13.85□□□□□ -0.19
VMP1-210ENST00000589823 MMP13P45452 471 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 SNRPD1P62314 119 aaKnown RBP13.85□□□□□ -0.19
VMP1-210ENST00000589823 IFI35P80217 286 aaPredicted RBP13.85□□□□□ -0.19
VMP1-210ENST00000589823 SLC10A7Q0GE19 358 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 SNX1Q13596 522 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 TUBB2AQ13885 445 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 SIX1Q15475 284 aaPredicted RBP13.85□□□□□ -0.19
VMP1-210ENST00000589823 PKN3Q6P5Z2 889 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 Q6ZVU0 165 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 SYT13Q7L8C5 426 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 SPEM1Q8N4L4 309 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 TEX26Q8N6G2 289 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 SLC35B2Q8TB61 432 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 HTR3CQ8WXA8 447 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 TUBB2BQ9BVA1 445 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 TM6SF2Q9BZW4 377 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 TNKS2Q9H2K2 1166 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 RBM22Q9NW64 420 aaKnown RBP eCLIP13.85□□□□□ -0.19
VMP1-210ENST00000589823 AMACRQ9UHK6 382 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 DNPEPQ9ULA0 475 aa13.85□□□□□ -0.19
VMP1-210ENST00000589823 ZNF148Q9UQR1 794 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms