RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 GNG11P61952 73 aa19.32■□□□□ 0.68
CLPTM1-209ENST00000588855 INO80DQ53TQ3 878 aaPredicted RBP19.32■□□□□ 0.68
CLPTM1-209ENST00000588855 C9orf64Q5T6V5 341 aa19.32■□□□□ 0.68
CLPTM1-209ENST00000588855 TSTD1Q8NFU3 115 aa19.32■□□□□ 0.68
CLPTM1-209ENST00000588855 HDAC11Q96DB2 347 aa19.32■□□□□ 0.68
CLPTM1-209ENST00000588855 TM6SF2Q9BZW4 377 aa19.32■□□□□ 0.68
CLPTM1-209ENST00000588855 CEP44Q9C0F1 390 aa19.32■□□□□ 0.68
CLPTM1-209ENST00000588855 POLMQ9NP87 494 aaPredicted RBP19.32■□□□□ 0.68
CLPTM1-209ENST00000588855 ZKSCAN5Q9Y2L8 839 aa19.32■□□□□ 0.68
CLPTM1-209ENST00000588855 APOC4-APOC2K7ER74 178 aa19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 BNIP3LO60238 219 aa19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 PEX11BO96011 259 aa19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 APOC2P02655 101 aa19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 CXCR5P32302 372 aa19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 COPAP53621 1224 aa19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 KLF1Q13351 362 aaPredicted RBP19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 CYTH1Q15438 398 aa19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 CCDC181Q5TID7 509 aa19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 ANO7Q6IWH7 933 aa19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 LRRC49Q8IUZ0 686 aa19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 PCDH20Q8N6Y1 951 aaKnown RBP19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 CCNYQ8ND76 341 aa19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 CASKIN2Q8WXE0 1202 aa19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 P3H4Q92791 437 aa19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 WDR24Q96S15 920 aa19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 LGMNQ99538 433 aa19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 SLC6A17Q9H1V8 727 aa19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 EML5Q05BV3 1969 aa19.31■□□□□ 0.68
CLPTM1-209ENST00000588855 TCRBV7S2A1N4TA0A589 114 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 TARSL2A2RTX5 802 aaKnown RBP19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 GALR2O43603 387 aaPredicted RBP19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 TJP3O95049 919 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 APBB3O95704 486 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 TDGF1P13385 188 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 PXNP49023 591 aaPredicted RBP19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 NR2C2P49116 596 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 SLC10A7Q0GE19 358 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 PDK1Q15118 436 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 TMCO4Q5TGY1 634 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 B4GALNT4Q76KP1 1039 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 CACUL1Q86Y37 369 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 STK40Q8N2I9 435 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 MDGA1Q8NFP4 955 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 OR2A12Q8NGT7 310 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 OR2T3Q8NH03 318 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 HMGB4Q8WW32 186 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 ZNF599Q96NL3 588 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 TSGA13Q96PP4 275 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 MKRN2Q9H000 416 aaKnown RBP19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 LHX3Q9UBR4 397 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 PPP1R12AO14974 1030 aaPredicted RBP19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 GABRG2P18507 467 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 NDUFV2P19404 249 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 CCNCP24863 283 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 OTUD4Q01804 1114 aaKnown RBP19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 CSTF1Q05048 431 aaKnown RBP19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 PPIDQ08752 370 aaKnown RBP19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 DMWDQ09019 674 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 LBRQ14739 615 aaKnown RBP19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 NOMO1Q15155 1222 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 ANGPT1Q15389 498 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 TIGD7Q6NT04 549 aaPredicted RBP19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 METTL3Q86U44 580 aaKnown RBP19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 CCDC13Q8IYE1 715 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 ACTL9Q8TC94 416 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 ISG20Q96AZ6 181 aaKnown RBP19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 EXOC2Q96KP1 924 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 FAM118BQ9BPY3 351 aa19.3■□□□□ 0.68
CLPTM1-209ENST00000588855 RHOAP61586 193 aa19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 AP1B1Q10567 949 aa19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 ELAVL3Q14576 367 aaKnown RBP19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 RFTN1Q14699 578 aaPredicted RBP19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 ATXN7L2Q5T6C5 722 aaPredicted RBP19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 DPY19L3Q6ZPD9 716 aa19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 BZW1Q7L1Q6 419 aaKnown RBP19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 ZC3H18Q86VM9 953 aaKnown RBP19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 RASSF3Q86WH2 238 aa19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 SLC13A5Q86YT5 568 aaPredicted RBP19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 CAMKK1Q8N5S9 505 aa19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 TSEN2Q8NCE0 465 aaKnown RBP19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 CHST14Q8NCH0 376 aa19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 ZNF419Q96HQ0 510 aaPredicted RBP19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 MRGPRX1Q96LB2 322 aa19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 CINPQ9BW66 212 aaPredicted RBP19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 BCCIPQ9P287 314 aaKnown RBP eCLIP19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 FBXO4Q9UKT5 387 aa19.29■□□□□ 0.68
CLPTM1-209ENST00000588855 ANKRD36A6QL64 1941 aa19.28■□□□□ 0.68
CLPTM1-209ENST00000588855 MUSKO15146 869 aa19.28■□□□□ 0.68
CLPTM1-209ENST00000588855 MATN3O15232 486 aa19.28■□□□□ 0.68
CLPTM1-209ENST00000588855 CEP104O60308 925 aa19.28■□□□□ 0.68
CLPTM1-209ENST00000588855 ALDH1A2O94788 518 aa19.28■□□□□ 0.68
CLPTM1-209ENST00000588855 GSRP00390 522 aa19.28■□□□□ 0.68
CLPTM1-209ENST00000588855 RGRP47804 291 aa19.28■□□□□ 0.68
CLPTM1-209ENST00000588855 NUBP1P53384 320 aa19.28■□□□□ 0.68
CLPTM1-209ENST00000588855 PRKD1Q15139 912 aaPredicted RBP19.28■□□□□ 0.68
CLPTM1-209ENST00000588855 CARD16Q5EG05 197 aa19.28■□□□□ 0.68
CLPTM1-209ENST00000588855 HEATR6Q6AI08 1181 aaKnown RBP19.28■□□□□ 0.68
CLPTM1-209ENST00000588855 ADAT2Q7Z6V5 191 aaKnown RBP19.28■□□□□ 0.68
CLPTM1-209ENST00000588855 TMPRSS6Q8IU80 811 aa19.28■□□□□ 0.68
CLPTM1-209ENST00000588855 OR2AP1Q8NGE2 309 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms