RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 CCZ1P86791 482 aaPredicted RBP20.59■□□□□ 0.89
DDX39A-207ENST00000588542 PMS2CLQ68D20 193 aa20.59■□□□□ 0.89
DDX39A-207ENST00000588542 LAIR1Q6GTX8 287 aa20.59■□□□□ 0.89
DDX39A-207ENST00000588542 ARHGAP36Q6ZRI8 547 aa20.59■□□□□ 0.89
DDX39A-207ENST00000588542 MAP7D3Q8IWC1 876 aa20.59■□□□□ 0.89
DDX39A-207ENST00000588542 PCDH20Q8N6Y1 951 aaKnown RBP20.59■□□□□ 0.89
DDX39A-207ENST00000588542 OR8D1Q8WZ84 308 aa20.59■□□□□ 0.89
DDX39A-207ENST00000588542 ISG20Q96AZ6 181 aaKnown RBP20.59■□□□□ 0.89
DDX39A-207ENST00000588542 CALR3Q96L12 384 aaKnown RBP20.59■□□□□ 0.89
DDX39A-207ENST00000588542 PABPC3Q9H361 631 aaKnown RBP20.59■□□□□ 0.89
DDX39A-207ENST00000588542 WSB2Q9NYS7 404 aaPredicted RBP20.59■□□□□ 0.89
DDX39A-207ENST00000588542 RAB23Q9ULC3 237 aa20.59■□□□□ 0.89
DDX39A-207ENST00000588542 ANKRD36A6QL64 1941 aa20.59■□□□□ 0.89
DDX39A-207ENST00000588542 DFFAO00273 331 aa20.58■□□□□ 0.89
DDX39A-207ENST00000588542 BNIP3LO60238 219 aa20.58■□□□□ 0.89
DDX39A-207ENST00000588542 CTSLP07711 333 aa20.58■□□□□ 0.89
DDX39A-207ENST00000588542 TNNT1P13805 278 aa20.58■□□□□ 0.89
DDX39A-207ENST00000588542 SLC8A1P32418 973 aa20.58■□□□□ 0.89
DDX39A-207ENST00000588542 METAP1P53582 386 aa20.58■□□□□ 0.89
DDX39A-207ENST00000588542 INO80DQ53TQ3 878 aaPredicted RBP20.58■□□□□ 0.89
DDX39A-207ENST00000588542 NCBP2-AS2Q69YL0 99 aa20.58■□□□□ 0.89
DDX39A-207ENST00000588542 SLC36A4Q6YBV0 504 aa20.58■□□□□ 0.89
DDX39A-207ENST00000588542 DAAM2Q86T65 1068 aa20.58■□□□□ 0.89
DDX39A-207ENST00000588542 PQLC3Q8N755 202 aa20.58■□□□□ 0.89
DDX39A-207ENST00000588542 CHST14Q8NCH0 376 aa20.58■□□□□ 0.89
DDX39A-207ENST00000588542 SERGEFQ9UGK8 458 aa20.58■□□□□ 0.89
DDX39A-207ENST00000588542 PPM1HQ9ULR3 514 aa20.58■□□□□ 0.89
DDX39A-207ENST00000588542 SCML1Q9UN30 329 aa20.58■□□□□ 0.89
DDX39A-207ENST00000588542 PIEZO1Q92508 2521 aa20.58■□□□□ 0.88
DDX39A-207ENST00000588542 EP300Q09472 2414 aaPredicted RBP20.57■□□□□ 0.88
DDX39A-207ENST00000588542 GON4LQ3T8J9 2241 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 FAM186AA6NE01 2351 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 LRRD1A4D1F6 860 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 ZNF487B1APH4 448 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 RNF103O00237 685 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 PSTPIP1O43586 416 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 GFRA3O60609 400 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 TMCC1O94876 653 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 ADH1BP00325 375 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 IL1BP01584 269 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 CD6P30203 668 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 PSMD8P48556 350 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 KIF5AQ12840 1032 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 PAFAH1B3Q15102 231 aaKnown RBP20.57■□□□□ 0.88
DDX39A-207ENST00000588542 CYTH1Q15438 398 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 ELF2Q15723 593 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 CARD16Q5EG05 197 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 ZFYVE27Q5T4F4 411 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 DPY19L3Q6ZPD9 716 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 VSIG1Q86XK7 387 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 PLPP6Q8IY26 295 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 AADATQ8N5Z0 425 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 LRRC57Q8N9N7 239 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 CASKIN2Q8WXE0 1202 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 VOPP1Q96AW1 172 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 TOE1Q96GM8 510 aaKnown RBP20.57■□□□□ 0.88
DDX39A-207ENST00000588542 RNF157Q96PX1 679 aa20.57■□□□□ 0.88
DDX39A-207ENST00000588542 DDX56Q9NY93 547 aaKnown RBP20.57■□□□□ 0.88
DDX39A-207ENST00000588542 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 GRID2IPA4D2P6 1211 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 MAP3K13O43283 966 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 MFSD11O43934 449 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 RHOBTB1O94844 696 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 KRT1P04264 644 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 C5AR1P21730 350 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 OXTRP30559 389 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 CHRNA3P32297 505 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 SERPINB6P35237 376 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 DRD3P35462 400 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 MARCKSL1P49006 195 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 RPL6Q02878 288 aaKnown RBP20.56■□□□□ 0.88
DDX39A-207ENST00000588542 IL10RBQ08334 325 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 TTC31Q49AM3 519 aaPredicted RBP20.56■□□□□ 0.88
DDX39A-207ENST00000588542 USP30Q70CQ3 517 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 DSG4Q86SJ6 1040 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 FAM124AQ86V42 546 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 TMEFF1Q8IYR6 380 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 TXLNBQ8N3L3 684 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 PIP4K2CQ8TBX8 421 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 LOXL4Q96JB6 756 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 CCDC114Q96M63 670 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 TM6SF2Q9BZW4 377 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 FBXL12Q9NXK8 326 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 UBA2Q9UBT2 640 aaPredicted RBP20.56■□□□□ 0.88
DDX39A-207ENST00000588542 IPO11Q9UI26 975 aaKnown RBP20.56■□□□□ 0.88
DDX39A-207ENST00000588542 WASF2Q9Y6W5 498 aa20.56■□□□□ 0.88
DDX39A-207ENST00000588542 A0A1W2PP55 124 aa20.55■□□□□ 0.88
DDX39A-207ENST00000588542 EPN2O95208 641 aa20.55■□□□□ 0.88
DDX39A-207ENST00000588542 GSRP00390 522 aa20.55■□□□□ 0.88
DDX39A-207ENST00000588542 ACSL1P33121 698 aa20.55■□□□□ 0.88
DDX39A-207ENST00000588542 DNA2P51530 1060 aa20.55■□□□□ 0.88
DDX39A-207ENST00000588542 CCNHP51946 323 aaPredicted RBP20.55■□□□□ 0.88
DDX39A-207ENST00000588542 NAP1L1P55209 391 aaKnown RBP20.55■□□□□ 0.88
DDX39A-207ENST00000588542 TAZQ16635 292 aa20.55■□□□□ 0.88
DDX39A-207ENST00000588542 SPDYCQ5MJ68 293 aa20.55■□□□□ 0.88
DDX39A-207ENST00000588542 MFSD7Q6UXD7 560 aa20.55■□□□□ 0.88
DDX39A-207ENST00000588542 LPCAT2Q7L5N7 544 aa20.55■□□□□ 0.88
DDX39A-207ENST00000588542 ALYREFQ86V81 257 aaKnown RBP20.55■□□□□ 0.88
DDX39A-207ENST00000588542 DEFB119Q8N690 84 aa20.55■□□□□ 0.88
DDX39A-207ENST00000588542 TMIEQ8NEW7 156 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms