RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 SKA1Q96BD8 255 aa6.69□□□□□ -1.34
TRAF4-213ENST00000578917 PPP1R16AQ96I34 528 aa6.69□□□□□ -1.34
TRAF4-213ENST00000578917 PSMB7Q99436 277 aa6.69□□□□□ -1.34
TRAF4-213ENST00000578917 EIF3CQ99613 913 aaKnown RBP6.69□□□□□ -1.34
TRAF4-213ENST00000578917 DNAJC7Q99615 494 aa6.69□□□□□ -1.34
TRAF4-213ENST00000578917 HEPHQ9BQS7 1158 aa6.69□□□□□ -1.34
TRAF4-213ENST00000578917 RTKNQ9BST9 563 aa6.69□□□□□ -1.34
TRAF4-213ENST00000578917 PCED1AQ9H1Q7 454 aa6.69□□□□□ -1.34
TRAF4-213ENST00000578917 C6orf106Q9H6K1 298 aaPredicted RBP6.69□□□□□ -1.34
TRAF4-213ENST00000578917 ZDHHC6Q9H6R6 413 aa6.69□□□□□ -1.34
TRAF4-213ENST00000578917 NHEJ1Q9H9Q4 299 aaPredicted RBP6.69□□□□□ -1.34
TRAF4-213ENST00000578917 AASDHPPTQ9NRN7 309 aa6.69□□□□□ -1.34
TRAF4-213ENST00000578917 RXFP3Q9NSD7 469 aa6.69□□□□□ -1.34
TRAF4-213ENST00000578917 ABHD10Q9NUJ1 306 aa6.69□□□□□ -1.34
TRAF4-213ENST00000578917 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.69□□□□□ -1.34
TRAF4-213ENST00000578917 IL36AQ9UHA7 158 aa6.69□□□□□ -1.34
TRAF4-213ENST00000578917 LCMT1Q9UIC8 334 aa6.69□□□□□ -1.34
TRAF4-213ENST00000578917 PPM1HQ9ULR3 514 aa6.69□□□□□ -1.34
TRAF4-213ENST00000578917 FZD4Q9ULV1 537 aa6.69□□□□□ -1.34
TRAF4-213ENST00000578917 FCF1Q9Y324 198 aaKnown RBP6.69□□□□□ -1.34
TRAF4-213ENST00000578917 HELZP42694 1942 aaKnown RBP6.69□□□□□ -1.34
TRAF4-213ENST00000578917 LNP1A1A4G5 178 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 ARHGAP42A6NI28 874 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 PLK4O00444 970 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 ARHGAP33O14559 1287 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 SLC30A4O14863 429 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 MFAP3LO75121 409 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 LRCH4O75427 683 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 LEFTY1O75610 366 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 PCDH8O95206 1070 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 IPO7O95373 1038 aaKnown RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 POP4O95707 220 aaKnown RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 XPAP23025 273 aaPredicted RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 CD27P26842 260 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 HNRNPH3P31942 346 aaKnown RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 PCK1P35558 622 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 NOP2P46087 812 aaKnown RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 CSNK1EP49674 416 aaKnown RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 SERPINH1P50454 418 aaKnown RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 VASPP50552 380 aaPredicted RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 PAPOLAP51003 745 aaKnown RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 ZNF135P52742 658 aaPredicted RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 NDST2P52849 883 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 RHOAP61586 193 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 SNRPD1P62314 119 aaKnown RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 CNTN1Q12860 1018 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 MESDQ14696 234 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 SPA17Q15506 151 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 CA9Q16790 459 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 SMTNL2Q2TAL5 461 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 MYLK3Q32MK0 819 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 SLC45A4Q5BKX6 768 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 CFAP58Q5T655 872 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 MANEALQ5VSG8 457 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 KIAA0895LQ68EN5 471 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 C22orf39Q6P5X5 142 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 SLC23A3Q6PIS1 610 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 SARM1Q6SZW1 724 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 DPY19L3Q6ZPD9 716 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 RFX8Q6ZV50 586 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 PRPF39Q86UA1 669 aaKnown RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 NLRP14Q86W24 1093 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 MAP7D3Q8IWC1 876 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 UMODL1-AS1Q8N2C9 162 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 AADATQ8N5Z0 425 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 ARFGAP1Q8N6T3 406 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 PCDH20Q8N6Y1 951 aaKnown RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 TMIEQ8NEW7 156 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 OR2A12Q8NGT7 310 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 ZNF564Q8TBZ8 553 aaPredicted RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 NSMCE1Q8WV22 266 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 DNASE2BQ8WZ79 361 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 BIRC7Q96CA5 298 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 HMCESQ96FZ2 354 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 CELF6Q96J87 481 aaKnown RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 BTBD6Q96KE9 485 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 CHP1Q99653 195 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 SNRNP25Q9BV90 132 aaKnown RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 CALN1Q9BXU9 219 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 ACE2Q9BYF1 805 aaPredicted RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 TM6SF2Q9BZW4 377 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 CEP44Q9C0F1 390 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 RBSNQ9H1K0 784 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 LUC7LQ9NQ29 371 aaKnown RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 FSCN3Q9NQT6 498 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 SPTLC3Q9NUV7 552 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 NDFIP2Q9NV92 336 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 DLL3Q9NYJ7 618 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 UVRAGQ9P2Y5 699 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 SERGEFQ9UGK8 458 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 EVLQ9UI08 416 aaPredicted RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 SARDHQ9UL12 918 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.68□□□□□ -1.34
TRAF4-213ENST00000578917 LAMA1P25391 3075 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 DMDP11532 3685 aa6.68□□□□□ -1.34
TRAF4-213ENST00000578917 MYO18AQ92614 2054 aaKnown RBP6.67□□□□□ -1.34
TRAF4-213ENST00000578917 A0A1B0GVT2 93 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 SSU72P8A0A1W2PR75 194 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 GOLGA6L6A8MZA4 724 aa6.67□□□□□ -1.34
TRAF4-213ENST00000578917 SLC7A4O43246 635 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms