RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 C9orf64Q5T6V5 341 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 TMCO4Q5TGY1 634 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 KIAA1211LQ6NV74 962 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 Q6ZVU0 165 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 CAMKK1Q8N5S9 505 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 PCDH20Q8N6Y1 951 aaKnown RBP14.24□□□□□ -0.13
RPAIN-217ENST00000575711 PTPRN2Q92932 1015 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 ISG20Q96AZ6 181 aaKnown RBP14.24□□□□□ -0.13
RPAIN-217ENST00000575711 HAUS1Q96CS2 278 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 ERLEC1Q96DZ1 483 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 OLFM3Q96PB7 478 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 TSGA13Q96PP4 275 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 HHIPQ96QV1 700 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 HERPUD2Q9BSE4 406 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 CINPQ9BW66 212 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-217ENST00000575711 BRD8Q9H0E9 1235 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 MTG2Q9H4K7 406 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 FBRSQ9HAH7 460 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 PRSS16Q9NQE7 514 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 SAE1Q9UBE0 346 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-217ENST00000575711 ZKSCAN5Q9Y2L8 839 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 FARP1Q9Y4F1 1045 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-217ENST00000575711 MUC22E2RYF6 1773 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-217ENST00000575711 SIN3BO75182 1162 aa14.23□□□□□ -0.13
RPAIN-217ENST00000575711 ATP1A1P05023 1023 aaKnown RBP14.23□□□□□ -0.13
RPAIN-217ENST00000575711 VAV1P15498 845 aa14.23□□□□□ -0.13
RPAIN-217ENST00000575711 RHOAP61586 193 aa14.23□□□□□ -0.13
RPAIN-217ENST00000575711 ZNF33AQ06730 810 aa14.23□□□□□ -0.13
RPAIN-217ENST00000575711 PPIDQ08752 370 aaKnown RBP14.23□□□□□ -0.13
RPAIN-217ENST00000575711 AP1B1Q10567 949 aa14.23□□□□□ -0.13
RPAIN-217ENST00000575711 LBRQ14739 615 aaKnown RBP14.23□□□□□ -0.13
RPAIN-217ENST00000575711 CCDC13Q8IYE1 715 aa14.23□□□□□ -0.13
RPAIN-217ENST00000575711 BBS5Q8N3I7 341 aa14.23□□□□□ -0.13
RPAIN-217ENST00000575711 TTC13Q8NBP0 860 aa14.23□□□□□ -0.13
RPAIN-217ENST00000575711 OR2T3Q8NH03 318 aa14.23□□□□□ -0.13
RPAIN-217ENST00000575711 LGMNQ99538 433 aa14.23□□□□□ -0.13
RPAIN-217ENST00000575711 TNKS2Q9H2K2 1166 aa14.23□□□□□ -0.13
RPAIN-217ENST00000575711 BCCIPQ9P287 314 aaKnown RBP eCLIP14.23□□□□□ -0.13
RPAIN-217ENST00000575711 SEPT3Q9UH03 358 aa14.23□□□□□ -0.13
RPAIN-217ENST00000575711 FBXO4Q9UKT5 387 aa14.23□□□□□ -0.13
RPAIN-217ENST00000575711 CHD5Q8TDI0 1954 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 K7ESF4 209 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 GALR2O43603 387 aaPredicted RBP14.22□□□□□ -0.13
RPAIN-217ENST00000575711 CEP104O60308 925 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 RNASEH1O60930 286 aaKnown RBP14.22□□□□□ -0.13
RPAIN-217ENST00000575711 ZNF821O75541 412 aaPredicted RBP14.22□□□□□ -0.13
RPAIN-217ENST00000575711 NEBLO76041 1014 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 CXCR5P32302 372 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 RENBPP51606 427 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 SNRPD1P62314 119 aaKnown RBP14.22□□□□□ -0.13
RPAIN-217ENST00000575711 OTUD4Q01804 1114 aaKnown RBP14.22□□□□□ -0.13
RPAIN-217ENST00000575711 CSTF1Q05048 431 aaKnown RBP14.22□□□□□ -0.13
RPAIN-217ENST00000575711 KLF1Q13351 362 aaPredicted RBP14.22□□□□□ -0.13
RPAIN-217ENST00000575711 ELAVL3Q14576 367 aaKnown RBP14.22□□□□□ -0.13
RPAIN-217ENST00000575711 ZNF235Q14590 738 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 NOMO1Q15155 1222 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 CYTH1Q15438 398 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 CARD16Q5EG05 197 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 MARC1Q5VT66 337 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 ANO7Q6IWH7 933 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 TSSK4Q6SA08 328 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 DSG4Q86SJ6 1040 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 SLC13A5Q86YT5 568 aaPredicted RBP14.22□□□□□ -0.13
RPAIN-217ENST00000575711 STK40Q8N2I9 435 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 PGBD3Q8N328 593 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 RYBPQ8N488 228 aaPredicted RBP14.22□□□□□ -0.13
RPAIN-217ENST00000575711 ACTL9Q8TC94 416 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 TFB1MQ8WVM0 346 aaKnown RBP14.22□□□□□ -0.13
RPAIN-217ENST00000575711 HMGB4Q8WW32 186 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 OR8D1Q8WZ84 308 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 FATE1Q969F0 183 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 PBKQ96KB5 322 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 NAPGQ99747 312 aaPredicted RBP14.22□□□□□ -0.13
RPAIN-217ENST00000575711 TM6SF2Q9BZW4 377 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 CD248Q9HCU0 757 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 HAUS2Q9NVX0 235 aa14.22□□□□□ -0.13
RPAIN-217ENST00000575711 HACD1B0YJ81 288 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 H7C0C1 242 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 MCF2LO15068 1137 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 MATN3O15232 486 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 ALOX15BO15296 676 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 IGSF6O95976 241 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 PEX11BO96011 259 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 GSRP00390 522 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 GABRG2P18507 467 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 NDUFV2P19404 249 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 HOXA6P31267 233 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 HSPA9P38646 679 aaKnown RBP14.21□□□□□ -0.13
RPAIN-217ENST00000575711 MMP13P45452 471 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 ATP5OP48047 213 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 COPAP53621 1224 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 SLC10A7Q0GE19 358 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 XRCC4Q13426 336 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 HNRNPDQ14103 355 aaKnown RBP14.21□□□□□ -0.13
RPAIN-217ENST00000575711 ANGPT1Q15389 498 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 DPY19L3Q6ZPD9 716 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 ZC3H18Q86VM9 953 aaKnown RBP14.21□□□□□ -0.13
RPAIN-217ENST00000575711 TMPRSS6Q8IU80 811 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 PLPP6Q8IY26 295 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 MAML2Q8IZL2 1156 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms