RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 MBD1Q9UIS9 605 aaPredicted RBP17.62■□□□□ 0.41
CLDN7-207ENST00000574070 HYOU1Q9Y4L1 999 aa17.62■□□□□ 0.41
CLDN7-207ENST00000574070 ZSCAN5CA6NGD5 496 aaPredicted RBP17.61■□□□□ 0.41
CLDN7-207ENST00000574070 C1QTNF3-AMACRE9PGA6 284 aa17.61■□□□□ 0.41
CLDN7-207ENST00000574070 MID1O15344 667 aa17.61■□□□□ 0.41
CLDN7-207ENST00000574070 CD48P09326 243 aa17.61■□□□□ 0.41
CLDN7-207ENST00000574070 COMTP21964 271 aa17.61■□□□□ 0.41
CLDN7-207ENST00000574070 SLC8A1P32418 973 aa17.61■□□□□ 0.41
CLDN7-207ENST00000574070 VAV2P52735 878 aa17.61■□□□□ 0.41
CLDN7-207ENST00000574070 PMS2CLQ68D20 193 aa17.61■□□□□ 0.41
CLDN7-207ENST00000574070 TMEM139Q8IV31 216 aa17.61■□□□□ 0.41
CLDN7-207ENST00000574070 TXLNBQ8N3L3 684 aa17.61■□□□□ 0.41
CLDN7-207ENST00000574070 LZTR1Q8N653 840 aa17.61■□□□□ 0.41
CLDN7-207ENST00000574070 NETO2Q8NC67 525 aa17.61■□□□□ 0.41
CLDN7-207ENST00000574070 TOE1Q96GM8 510 aaKnown RBP17.61■□□□□ 0.41
CLDN7-207ENST00000574070 FAM129BQ96TA1 746 aa17.61■□□□□ 0.41
CLDN7-207ENST00000574070 OMDQ99983 421 aa17.61■□□□□ 0.41
CLDN7-207ENST00000574070 CEP44Q9C0F1 390 aa17.61■□□□□ 0.41
CLDN7-207ENST00000574070 PABPC3Q9H361 631 aaKnown RBP17.61■□□□□ 0.41
CLDN7-207ENST00000574070 SP110Q9HB58 689 aa17.61■□□□□ 0.41
CLDN7-207ENST00000574070 USP36Q9P275 1121 aaKnown RBP17.61■□□□□ 0.41
CLDN7-207ENST00000574070 SCML1Q9UN30 329 aa17.61■□□□□ 0.41
CLDN7-207ENST00000574070 CNOT1A5YKK6 2376 aaKnown RBP17.61■□□□□ 0.41
CLDN7-207ENST00000574070 USP24Q9UPU5 2620 aa17.61■□□□□ 0.41
CLDN7-207ENST00000574070 A0A0A6YYK5 440 aaPredicted RBP17.6■□□□□ 0.41
CLDN7-207ENST00000574070 A0A1W2PP55 124 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 RNASEH2AO75792 299 aaKnown RBP17.6■□□□□ 0.41
CLDN7-207ENST00000574070 ADH1BP00325 375 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 RETP07949 1114 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 SERPINB6P35237 376 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 PAPOLAP51003 745 aaKnown RBP17.6■□□□□ 0.41
CLDN7-207ENST00000574070 CREB5Q02930 508 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 MMRN1Q13201 1228 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 SERINC3Q13530 473 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 DPYSL3Q14195 570 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 PDK2Q15119 407 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 FAM46CQ5VWP2 391 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 HDDC3Q8N4P3 179 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 PCDH20Q8N6Y1 951 aaKnown RBP17.6■□□□□ 0.41
CLDN7-207ENST00000574070 LOXL4Q96JB6 756 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 DESI2Q9BSY9 194 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 GPR174Q9BXC1 333 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 TM6SF2Q9BZW4 377 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 KLC2Q9H0B6 622 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 ARRDC1-AS1Q9H2J1 176 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 LRRC19Q9H756 370 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 FBXL12Q9NXK8 326 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 RCOR3Q9P2K3 495 aaPredicted RBP17.6■□□□□ 0.41
CLDN7-207ENST00000574070 REXO2Q9Y3B8 237 aaKnown RBP17.6■□□□□ 0.41
CLDN7-207ENST00000574070 MFHAS1Q9Y4C4 1052 aa17.6■□□□□ 0.41
CLDN7-207ENST00000574070 LRRD1A4D1F6 860 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 MCF2LO15068 1137 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 ALOX15BO15296 676 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 NRDCO43847 1150 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 BUB1BO60566 1050 aaPredicted RBP17.59■□□□□ 0.41
CLDN7-207ENST00000574070 KRT1P04264 644 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 C5AR1P21730 350 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 CHRNA3P32297 505 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 HADHBP55084 474 aaKnown RBP17.59■□□□□ 0.41
CLDN7-207ENST00000574070 ST3GAL2Q16842 350 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 POM121L1PQ3SYA9 428 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 CARD16Q5EG05 197 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 RHOT1Q8IXI2 618 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 NPWQ8N729 165 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 OR2A12Q8NGT7 310 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 PIP4K2CQ8TBX8 421 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 GRIN3AQ8TCU5 1115 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 ZNF670Q9BS34 389 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 RTKNQ9BST9 563 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 BTBD1Q9H0C5 482 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 GOLPH3Q9H4A6 298 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 ETNK2Q9NVF9 386 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 WSB2Q9NYS7 404 aaPredicted RBP17.59■□□□□ 0.41
CLDN7-207ENST00000574070 UBA2Q9UBT2 640 aaPredicted RBP17.59■□□□□ 0.41
CLDN7-207ENST00000574070 ALG6Q9Y672 507 aa17.59■□□□□ 0.41
CLDN7-207ENST00000574070 CXorf51AA0A1B0GTR3 108 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 RCCD1A6NED2 376 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 J3KR12 359 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 KPNA3O00505 521 aaPredicted RBP17.58■□□□□ 0.4
CLDN7-207ENST00000574070 TMCC1O94876 653 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 EPN2O95208 641 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 CD160O95971 181 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 PRNPP04156 253 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 KDELR1P24390 212 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 ARSEP51690 589 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 RHOAP61586 193 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 SNRPD1P62314 119 aaKnown RBP17.58■□□□□ 0.4
CLDN7-207ENST00000574070 SPEM2Q0P670 501 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 KIF5AQ12840 1032 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 ANKRD20A8PQ5CZ79 823 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 LYSMD4Q5XG99 296 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 DPY19L3Q6ZPD9 716 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 CYP2U1Q7Z449 544 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 DAAM2Q86T65 1068 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 ARHGAP12Q8IWW6 846 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 RGL4Q8IZJ4 473 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 CHST14Q8NCH0 376 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 CCDC112Q8NEF3 446 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 FAM71BQ8TC56 605 aa17.58■□□□□ 0.4
CLDN7-207ENST00000574070 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms