RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 LRIT1Q9P2V4 623 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 UBA2Q9UBT2 640 aaPredicted RBP3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 HSPB7Q9UBY9 170 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 KLQ9UEF7 1012 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 STEAP1Q9UHE8 339 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 CDH22Q9UJ99 828 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 INTS6Q9UL03 887 aaKnown RBP3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 MTMR6Q9Y217 621 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 KCNK7Q9Y2U2 307 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 COPG1Q9Y678 874 aaKnown RBP3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 AP1M2Q9Y6Q5 423 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 AATKQ6ZMQ8 1374 aa3.48□□□□□ -1.85
HERPUD1-211ENST00000566550 A0A1W2PQM1 296 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 UBE2QL1A1L167 161 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 OR2A25A4D2G3 310 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 NPIPB13A6NJU9 1138 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 LRRC53A6NM62 1247 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 OR6C76A6NM76 312 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 TBKBP1A7MCY6 615 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 NPIPB5A8MRT5 1133 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 PRR5-ARHGAP8B1AHC4 643 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 NPIPB4C9JG80 1138 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 CYR61O00622 381 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 PGRMC2O15173 223 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 NKX2-8O15522 239 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 CA12O43570 354 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 STX6O43752 255 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 PAGE4O60829 102 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 CYP7B1O75881 506 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 TPPPO94811 219 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 IPO7O95373 1038 aaKnown RBP3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 INHBAP08476 426 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 PRR35P0CG20 571 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 CYP4B1P13584 511 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 EEF2P13639 858 aaKnown RBP3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 IL7RP16871 459 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 ERCC2P18074 760 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 TCF7P36402 384 aaPredicted RBP3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 CAMPP49913 170 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 BMXP51813 675 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 ADCY7P51828 1080 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 CHN2P52757 468 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 EFNA5P52803 228 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 GALCP54803 685 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 SLC12A3P55017 1021 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 AKAP17AQ02040 695 aaKnown RBP3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 KIAA2012Q0VF49 1180 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 CSTF3Q12996 717 aaKnown RBP3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 IKQ13123 557 aaPredicted RBP3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 MTAPQ13126 283 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 ALKBH1Q13686 389 aaKnown RBP3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 ALCAMQ13740 583 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 IL11RAQ14626 422 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 GSTA3Q16772 222 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 BMT2Q1RMZ1 405 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 GXYLT1Q4G148 440 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 GAGE13Q4V321 117 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 GLRA4Q5JXX5 417 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 C6orf163Q5TEZ5 329 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 NT5DC1Q5TFE4 455 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 CST9LP1Q5W188 147 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 SLC9A4Q6AI14 798 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 NAPEPLDQ6IQ20 393 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 GRHL2Q6ISB3 625 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 OLFM4Q6UX06 510 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 ISLR2Q6UXK2 745 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 PPP1R21Q6ZMI0 780 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 RNF144BQ7Z419 303 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 HOOK3Q86VS8 718 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 ARHGEF25Q86VW2 580 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 GHDCQ8N2G8 530 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 DPP10Q8N608 796 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 TP53I13Q8NBR0 393 aaPredicted RBP3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 ZNF540Q8NDQ6 660 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 MCUQ8NE86 351 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 TEKT4Q8WW24 435 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 LPPQ93052 612 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 HS6ST2Q96MM7 605 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 NLRP4Q96MN2 994 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 ATP6V0BQ99437 205 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 PKP4Q99569 1192 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 TUBB6Q9BUF5 446 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 VN1R3Q9BXE9 311 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 TEX13BQ9BXU2 312 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 HDHD5Q9BXW7 423 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 NUF2Q9BZD4 464 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 SLC5A7Q9GZV3 580 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 PCED1AQ9H1Q7 454 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 C1orf21Q9H246 121 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 PLK3Q9H4B4 646 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 L2HGDHQ9H9P8 463 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 LIN28AQ9H9Z2 209 aaKnown RBP3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 RXFP3Q9NSD7 469 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 ARHGEF38Q9NXL2 777 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 MCM9Q9NXL9 1143 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 OGFRQ9NZT2 677 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 FETUBQ9UGM5 382 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 ARMCX3Q9UH62 379 aaPredicted RBP3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 ANAPC2Q9UJX6 822 aa3.47□□□□□ -1.85
HERPUD1-211ENST00000566550 COL15A1P39059 1388 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms