RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 PIMREGQ9BSJ6 248 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 IFT27Q9BW83 186 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 AAMDCQ9H7C9 122 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 NLKQ9UBE8 527 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 CAMK2AQ9UQM7 478 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 CNPY2Q9Y2B0 182 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 OR6C68A6NDL8 312 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 RHODO00212 210 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 NEURL1O76050 574 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 WNT1P04628 370 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 URODP06132 367 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 CHRM4P08173 479 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 SKIV2L2P42285 1042 aaKnown RBP4.8□□□□□ -1.64
CHD9-215ENST00000565442 ZNF91Q05481 1191 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 SUPT20HL1Q3ZLR7 823 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 PLK5Q496M5 336 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 ZNF766Q5HY98 468 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 TTLL5Q6EMB2 1281 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 SLC18B1Q6NT16 456 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 FAM57BQ71RH2 274 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 H1FNTQ75WM6 255 aaPredicted RBP4.8□□□□□ -1.64
CHD9-215ENST00000565442 R3HCC1LQ7Z5L2 792 aaKnown RBP4.8□□□□□ -1.64
CHD9-215ENST00000565442 ZDHHC17Q8IUH5 632 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 ARMC8Q8IUR7 673 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 TNIP2Q8NFZ5 429 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 BCAS4Q8TDM0 211 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 ADAMTS15Q8TE58 950 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 UCMAQ8WVF2 138 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 IGFBPL1Q8WX77 278 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 RFFLQ8WZ73 363 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 HSPH1Q92598 858 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 HDAC2Q92769 488 aaKnown RBP4.8□□□□□ -1.64
CHD9-215ENST00000565442 KIF1BPQ96EK5 621 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 HMCESQ96FZ2 354 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 ZNF419Q96HQ0 510 aaPredicted RBP4.8□□□□□ -1.64
CHD9-215ENST00000565442 SLC25A18Q9H1K4 315 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 HIPK3Q9H422 1215 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 VEZTQ9HBM0 779 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 SEMA4BQ9NPR2 832 aaPredicted RBP4.8□□□□□ -1.64
CHD9-215ENST00000565442 TMEM184CQ9NVA4 438 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 TMEM45AQ9NWC5 275 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 BEX4Q9NWD9 120 aaPredicted RBP4.8□□□□□ -1.64
CHD9-215ENST00000565442 SLC25A10Q9UBX3 287 aaPredicted RBP4.8□□□□□ -1.64
CHD9-215ENST00000565442 ICKQ9UPZ9 632 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 NAALADL1Q9UQQ1 740 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 LAMP3Q9UQV4 416 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 OSGIN2Q9Y236 505 aa4.8□□□□□ -1.64
CHD9-215ENST00000565442 A0A0A0MQY5 61 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 TMEM247A6NEH6 219 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 TEX22C9J3V5 150 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 TSPAN4O14817 238 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 CEP104O60308 925 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 BCAR3O75815 825 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 RTN3O95197 1032 aaPredicted RBP4.79□□□□□ -1.64
CHD9-215ENST00000565442 DDAH2O95865 285 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 F9P00740 461 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 NR4A2P43354 598 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 RPS13P62277 151 aaKnown RBP4.79□□□□□ -1.64
CHD9-215ENST00000565442 PMPCAQ10713 525 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 DAZAP2Q15038 168 aaPredicted RBP4.79□□□□□ -1.64
CHD9-215ENST00000565442 MAPRE1Q15691 268 aaKnown RBP4.79□□□□□ -1.64
CHD9-215ENST00000565442 VWA5B1Q5TIE3 1220 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 TMEM268Q5VZI3 342 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 TMED8Q6PL24 325 aaPredicted RBP4.79□□□□□ -1.64
CHD9-215ENST00000565442 DDIASQ8IXT1 998 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 PLD5Q8N7P1 536 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 DNAAF1Q8NEP3 725 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 ZCCHC10Q8TBK6 192 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 EME1Q96AY2 570 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 SIGLEC11Q96RL6 698 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 SPRTNQ9H040 489 aaPredicted RBP4.79□□□□□ -1.64
CHD9-215ENST00000565442 USP44Q9H0E7 712 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 CXorf56Q9H5V9 222 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 PAPOLBQ9NRJ5 636 aaKnown RBP4.79□□□□□ -1.64
CHD9-215ENST00000565442 ZDHHC7Q9NXF8 308 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 PEMTQ9UBM1 199 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 AASSQ9UDR5 926 aa4.79□□□□□ -1.64
CHD9-215ENST00000565442 GOLGA6L10A0A0M3HER8 536 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 CYSRT1A8MQ03 144 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 KCNU1A8MYU2 1149 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 ADAM10O14672 748 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 ADAP00813 363 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 CTSAP10619 480 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 CYP19A1P11511 503 aaPredicted RBP4.78□□□□□ -1.64
CHD9-215ENST00000565442 HOXD9P28356 352 aaPredicted RBP4.78□□□□□ -1.64
CHD9-215ENST00000565442 UFM1P61960 85 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 TSTQ16762 297 aaKnown RBP4.78□□□□□ -1.64
CHD9-215ENST00000565442 PRICKLE4Q2TBC4 344 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 MIDNQ504T8 468 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 ZNF667Q5HYK9 610 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 SLC2A7Q6PXP3 512 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 ZNF793Q6ZN11 406 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 C1orf122Q6ZSJ8 110 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 B4GALNT4Q76KP1 1039 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 UBE2Q1Q7Z7E8 422 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 TBC1D1Q86TI0 1168 aaPredicted RBP4.78□□□□□ -1.64
CHD9-215ENST00000565442 CMASQ8NFW8 434 aaPredicted RBP4.78□□□□□ -1.64
CHD9-215ENST00000565442 KCNG4Q8TDN1 519 aa4.78□□□□□ -1.64
CHD9-215ENST00000565442 WIPF2Q8TF74 440 aaPredicted RBP4.78□□□□□ -1.64
CHD9-215ENST00000565442 FAR1Q8WVX9 515 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms