RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 HTRA2O43464 458 aaPredicted RBP14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 BCAS2O75934 225 aaPredicted RBP14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 ASS1P00966 412 aaKnown RBP14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 HOXC6P09630 235 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 TMEM191BP0C7N4 346 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 ENO3P13929 434 aaPredicted RBP14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 MAP4P27816 1152 aaKnown RBP14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 HNRNPFP52597 415 aaKnown RBP14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 RPL7AP62424 266 aaKnown RBP14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 NOMO3P69849 1222 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 TRPC3Q13507 836 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 TFDP3Q5H9I0 405 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 FRA10AC1Q70Z53 315 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 CYP2U1Q7Z449 544 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 BTLAQ7Z6A9 289 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 MMAAQ8IVH4 418 aaKnown RBP14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 ANKK1Q8NFD2 765 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 POLR1BQ9H9Y6 1135 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 MRPL47Q9HD33 250 aaKnown RBP14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 ERAP1Q9NZ08 941 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 SPAG6O75602 509 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 RSL1D1O76021 490 aaKnown RBP14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 ENO2P09104 434 aaPredicted RBP14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 ME2P23368 584 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 DUOXA2Q1HG44 320 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 LDLRAP1Q5SW96 308 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 SLC9A4Q6AI14 798 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 CALML6Q8TD86 181 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 BRI3BPQ8WY22 251 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 MS4A4AQ96JQ5 239 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 C1orf50Q9BV19 199 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 CISHQ9NSE2 258 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 MKS1Q9NXB0 559 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 DOCK3Q8IZD9 2030 aa14.25□□□□□ -0.13
GTF3C1-203ENST00000562609 ACKR2O00590 384 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 ZNF195O14628 629 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 HBP1O60381 514 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 NOL3O60936 208 aaKnown RBP14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 C22orf31O95567 290 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 GSRP00390 522 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 C1QAP02745 245 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 GNAO1P09471 354 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 CHRNB1P11230 501 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 IFITM2Q01629 132 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 MBTD1Q05BQ5 628 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 MTX3Q5HYI7 312 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 MPZL3Q6UWV2 235 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 C11orf74Q86VG3 221 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 WDR49Q8IV35 697 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 ADAMTS16Q8TE57 1224 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 SORT1Q99523 831 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 CDT1Q9H211 546 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 SNX13Q9Y5W8 968 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 ASB14A6NK59 587 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 NFICP08651 508 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 ARRB2P32121 409 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 NSUN2Q08J23 767 aaKnown RBP eCLIP14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 SLC10A2Q12908 348 aaPredicted RBP14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 PGS1Q32NB8 556 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 FAM47CQ5HY64 1035 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 MAMDC4Q6UXC1 1216 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 DPP9Q86TI2 863 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 UNC45BQ8IWX7 931 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 FAM71DQ8N9W8 422 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 LILRB4Q8NHJ6 448 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 TFAP2BQ92481 460 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 BHMTQ93088 406 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 MAELQ96JY0 434 aaKnown RBP14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 ZNF641Q96N77 438 aaPredicted RBP14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 CENPOQ9BU64 300 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 FZD8Q9H461 694 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 FAM96AQ9H5X1 160 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 SEPT3Q9UH03 358 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 SIP14410 1827 aa14.24□□□□□ -0.13
GTF3C1-203ENST00000562609 BCL10O95999 233 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 CCNA2P20248 432 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 GNL1P36915 607 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 CDKN2BP42772 138 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 TUFMP49411 452 aaKnown RBP14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 MLLT10P55197 1068 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 TSPY1Q01534 308 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 ZNF699Q32M78 642 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 PRAMEF19Q5SWL8 479 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 CYP4A22Q5TCH4 519 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 DPH6Q7L8W6 267 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 OR7G1Q8NGA0 311 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 CEP295NLQ96MC4 621 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 PTPRHQ9HD43 1115 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 SMYD2Q9NRG4 433 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 TJP2Q9UDY2 1190 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 N6AMT1Q9Y5N5 214 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 PIK3R2O00459 728 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 SNAI1O95863 264 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 TTKP33981 857 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 RFC1P35251 1148 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 IDUAP35475 653 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 GRIA3P42263 894 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 DPP6P42658 865 aa14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 NKX2-5P52952 324 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-203ENST00000562609 ZNF792Q3KQV3 632 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms