RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 CYGBQ8WWM9 190 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 HNRNPABQ99729 332 aaKnown RBP16.74■□□□□ 0.27
TPM1-228ENST00000560975 BCO2Q9BYV7 579 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 CCDC167Q9P0B6 97 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 SUCOQ9UBS9 1254 aaKnown RBP16.74■□□□□ 0.27
TPM1-228ENST00000560975 CORINQ9Y5Q5 1042 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 E2F6O75461 281 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 PRKCBP05771 671 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 ZNF182P17025 639 aaPredicted RBP16.74■□□□□ 0.27
TPM1-228ENST00000560975 ZNF24P17028 368 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 GOT1P17174 413 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 SLC7A1P30825 629 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 GRIA3P42263 894 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 ACADVLP49748 655 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 ITGADQ13349 1161 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 TRIP11Q15643 1979 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 CLEC14AQ86T13 490 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 C1orf127Q8N9H9 656 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 NGLY1Q96IV0 654 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 KCTD15Q96SI1 283 aaPredicted RBP16.74■□□□□ 0.27
TPM1-228ENST00000560975 OMDQ99983 421 aa16.74■□□□□ 0.27
TPM1-228ENST00000560975 IPO11Q9UI26 975 aaKnown RBP16.74■□□□□ 0.27
TPM1-228ENST00000560975 WDR46O15213 610 aaKnown RBP16.73■□□□□ 0.27
TPM1-228ENST00000560975 ALDH2P05091 517 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 ASNSP08243 561 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 MAGEA12P43365 314 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 YAP1P46937 504 aaKnown RBP16.73■□□□□ 0.27
TPM1-228ENST00000560975 FKBP1AP62942 108 aaKnown RBP16.73■□□□□ 0.27
TPM1-228ENST00000560975 GRM1Q13255 1194 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 CYP2A13Q16696 494 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 PMF1Q6P1K2 205 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 TRIM50Q86XT4 487 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 LSMEM2Q8N112 164 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 RNF149Q8NC42 400 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 ATG4CQ96DT6 458 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 SGF29Q96ES7 293 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 FBXL20Q96IG2 436 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 CSPG4P5Q96PW8 444 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 HEPHQ9BQS7 1158 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 CDH7Q9ULB5 785 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 AP4E1Q9UPM8 1137 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 B4GALT5O43286 388 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 MPOP05164 745 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 PROZP22891 400 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 KPNA1P52294 538 aaPredicted RBP16.73■□□□□ 0.27
TPM1-228ENST00000560975 AGKQ53H12 422 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 NCBP2-AS2Q69YL0 99 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 STYK1Q6J9G0 422 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 LRRC71Q8N4P6 559 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 SLC15A4Q8N697 577 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 KCTD4Q8WVF5 259 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 TANKQ92844 425 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 PBXIP1Q96AQ6 731 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 MFSD3Q96ES6 412 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 EFHD1Q9BUP0 239 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 BRD8Q9H0E9 1235 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 MUC3BQ9H195 1237 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 UNC93B1Q9H1C4 597 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 GTSE1Q9NYZ3 720 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 HESX1Q9UBX0 185 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 RUVBL2Q9Y230 463 aaKnown RBP16.73■□□□□ 0.27
TPM1-228ENST00000560975 SNX9Q9Y5X1 595 aa16.73■□□□□ 0.27
TPM1-228ENST00000560975 CNTNAP1P78357 1384 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 SLC22A2O15244 555 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 SBK3P0C264 359 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 VDRP11473 427 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 NDST1P52848 882 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 GOLGA7BQ2TAP0 167 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 EEF1DP3Q658K8 133 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 PPP4R4Q6NUP7 873 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 ZYG11AQ6WRX3 759 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 SPNS2Q8IVW8 549 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.72■□□□□ 0.27
TPM1-228ENST00000560975 P2RY11Q96G91 374 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 TBCBQ99426 244 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 APOL2Q9BQE5 337 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 GBA2Q9HCG7 927 aaPredicted RBP16.72■□□□□ 0.27
TPM1-228ENST00000560975 IARS2Q9NSE4 1012 aaKnown RBP16.72■□□□□ 0.27
TPM1-228ENST00000560975 MAP3K20Q9NYL2 800 aaKnown RBP16.72■□□□□ 0.27
TPM1-228ENST00000560975 RNF103-CHMP3A0A140T963 221 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 MDM4O15151 490 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 H2AFYO75367 372 aaKnown RBP16.72■□□□□ 0.27
TPM1-228ENST00000560975 GSTT2P0CG29 244 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 GSTT2BP0CG30 244 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 GRM5P41594 1212 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 FSTL1Q12841 308 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 SPIDRQ14159 915 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 SURF1Q15526 300 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 SPANXN3Q5MJ09 141 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 REP15Q6BDI9 236 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 DCLRE1AQ6PJP8 1040 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 ZC3H7AQ8IWR0 971 aaKnown RBP16.72■□□□□ 0.27
TPM1-228ENST00000560975 CCDC185Q8N715 623 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 DNAAF3Q8N9W5 541 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 DCPSQ96C86 337 aaKnown RBP16.72■□□□□ 0.27
TPM1-228ENST00000560975 ADI1Q9BV57 179 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 CACNA2D2Q9NY47 1150 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 TLK1Q9UKI8 766 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 ADAM28Q9UKQ2 775 aa16.72■□□□□ 0.27
TPM1-228ENST00000560975 TSC22D4Q9Y3Q8 395 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms