RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SLC46A2Q9BY10 475 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 TASP1Q9H6P5 420 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 PDFQ9HBH1 243 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 SYBUQ9NX95 663 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 UBP1Q9NZI7 540 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 CFAP97Q9P2B7 532 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 ZNF180Q9UJW8 692 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 NYNRINQ9P2P1 1898 aaKnown RBP12.69□□□□□ -0.38
SHMT2-233ENST00000557529 SHROOM3Q8TF72 1996 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 A0A0D9SEW6 157 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 IQANK1A0A1B0GTG1 560 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 FAM159BA6NKW6 160 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 TBL1XO60907 577 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 USP12O75317 370 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 RFPL2O75678 378 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 EPCAMP16422 314 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 KRT15P19012 456 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 HOXD9P28356 352 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-233ENST00000557529 AVPR1AP37288 418 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 SGSHP51688 502 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 ITKQ08881 620 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 NAB1Q13506 487 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 MPP7Q5T2T1 576 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 GPR158Q5T848 1215 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 LGSNQ5TDP6 509 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 FAM109BQ6ICB4 259 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-233ENST00000557529 SPRED2Q7Z698 418 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 TRABD2AQ86V40 505 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 SLC26A11Q86WA9 606 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 CTAGE3PQ8IX95 158 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 CYP4X1Q8N118 509 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 IPMKQ8NFU5 416 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 OR7D4Q8NG98 312 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 SPATA22Q8NHS9 363 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 DCAKDQ8WVC6 231 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 CDKL2Q92772 493 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 SPON2Q9BUD6 331 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 FICDQ9BVA6 458 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 ACE2Q9BYF1 805 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-233ENST00000557529 POLR1EQ9GZS1 481 aaKnown RBP12.69□□□□□ -0.38
SHMT2-233ENST00000557529 LMAN2LQ9H0V9 348 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 PLAC1Q9HBJ0 212 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 ATP13A1Q9HD20 1204 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 MOCS1Q9NZB8 636 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 DNMT3BQ9UBC3 853 aaKnown RBP12.69□□□□□ -0.38
SHMT2-233ENST00000557529 UBA2Q9UBT2 640 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-233ENST00000557529 SEPT3Q9UH03 358 aa12.69□□□□□ -0.38
SHMT2-233ENST00000557529 OBSL1O75147 1896 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 MTCL1Q9Y4B5 1905 aaKnown RBP12.68□□□□□ -0.38
SHMT2-233ENST00000557529 FAM237BA0A1B0GVD1 139 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 E2F8A0AVK6 867 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 H0Y626 953 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 LEFTY2O00292 366 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 ZNF197O14709 1029 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 PMPCBO75439 489 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 USP1O94782 785 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 LUC7L3O95232 432 aaKnown RBP12.68□□□□□ -0.38
SHMT2-233ENST00000557529 MT-CYBP00156 380 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-233ENST00000557529 C1QAP02745 245 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 RHOP08100 348 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 BRAFP15056 766 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 GJA1P17302 382 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 GBP2P32456 591 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-233ENST00000557529 ADRA1AP35348 466 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 SERPINB9P50453 376 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 WNT3AP56704 352 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 GNGT1P63211 74 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 CRADDP78560 199 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 ZXDBP98169 803 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 CRYMQ14894 314 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 SLC14A2Q15849 920 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 MPPE1Q53F39 396 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 RNF219Q5W0B1 726 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-233ENST00000557529 CXorf57Q6NSI4 855 aaKnown RBP12.68□□□□□ -0.38
SHMT2-233ENST00000557529 POTEHQ6S545 545 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 KDELC1Q6UW63 502 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 PRPF39Q86UA1 669 aaKnown RBP12.68□□□□□ -0.38
SHMT2-233ENST00000557529 TMEM135Q86UB9 458 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 SRRM1Q8IYB3 904 aaKnown RBP12.68□□□□□ -0.38
SHMT2-233ENST00000557529 CMTM8Q8IZV2 173 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 CARNMT1Q8N4J0 409 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.68□□□□□ -0.38
SHMT2-233ENST00000557529 PPM1NQ8N819 430 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 PTCD2Q8WV60 388 aaKnown RBP12.68□□□□□ -0.38
SHMT2-233ENST00000557529 CENPTQ96BT3 561 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 MRRFQ96E11 262 aaKnown RBP12.68□□□□□ -0.38
SHMT2-233ENST00000557529 PRKD2Q9BZL6 878 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 MUC3BQ9H195 1237 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 TRABDQ9H4I3 376 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 PIH1D1Q9NWS0 290 aaKnown RBP12.68□□□□□ -0.38
SHMT2-233ENST00000557529 HCFC1R1Q9NWW0 138 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-233ENST00000557529 SOX13Q9UN79 622 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 YBX2Q9Y2T7 364 aaKnown RBP12.68□□□□□ -0.38
SHMT2-233ENST00000557529 RPS6KL1Q9Y6S9 549 aa12.68□□□□□ -0.38
SHMT2-233ENST00000557529 SRRM3A6NNA2 597 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-233ENST00000557529 KRT37O76014 449 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 CES1P23141 567 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 CCR2P41597 374 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 CD86P42081 329 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms