RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 SPAM1P38567 509 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 NPY2RP49146 381 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 SLC7A2P52569 658 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 GPX6P59796 221 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 SPCS3P61009 180 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 PHC1P78364 1004 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 ADAM17P78536 824 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 ZNF177Q13360 481 aaPredicted RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 PMS2P3Q13401 168 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 DYRK1AQ13627 763 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 PON2Q15165 354 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 KRT31Q15323 416 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 FAM98BQ52LJ0 330 aaKnown RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 DALRD3Q5D0E6 543 aaKnown RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 FAM47CQ5HY64 1035 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 ADGRF1Q5T601 910 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 SULT1C3Q6IMI6 304 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 RINT1Q6NUQ1 792 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 LETMD1Q6P1Q0 360 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 XRRA1Q6P2D8 792 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 FOXR2Q6PJQ5 311 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 DPP8Q6V1X1 898 aaPredicted RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 SETD3Q86TU7 594 aaPredicted RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 ZC3H18Q86VM9 953 aaKnown RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 PSTKQ8IV42 348 aaKnown RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 ERI1Q8IV48 349 aaKnown RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 FAM217AQ8IXS0 508 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 OR8H3Q8N146 312 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 MPP5Q8N3R9 675 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 FBXL6Q8N531 539 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 UBL4BQ8N7F7 174 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 PPM1NQ8N819 430 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 LRRN4CLQ8ND94 238 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 SIMC1Q8NDZ2 872 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 OR7D4Q8NG98 312 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 DNAJB8Q8NHS0 232 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 NCOA7Q8NI08 942 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 VANGL1Q8TAA9 524 aaPredicted RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 URGCPQ8TCY9 931 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 ZNF384Q8TF68 577 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 GRAMD1AQ96CP6 724 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 PDXPQ96GD0 296 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 ZNF333Q96JL9 665 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 FAM71F1Q96KD3 344 aaPredicted RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 LRGUKQ96M69 825 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 NT5C1BQ96P26 610 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 AGAP2Q99490 1192 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 PKP4Q99569 1192 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 MIPEPQ99797 713 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 TREX2Q9BQ50 279 aaPredicted RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 DUSP23Q9BVJ7 150 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 HEMGNQ9BXL5 484 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 FAM126AQ9BYI3 521 aaPredicted RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 TXLNGYQ9BZA5 131 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 TWSG1Q9GZX9 223 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 SLC22A4Q9H015 551 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 RAVER2Q9HCJ3 691 aaKnown RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 UFSP2Q9NUQ7 469 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 KLHL11Q9NVR0 708 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 ADPRHL2Q9NX46 363 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 PLK2Q9NYY3 685 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 VPS54Q9P1Q0 977 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 DLGAP4Q9Y2H0 992 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 BCL9O00512 1426 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 TIAM1Q13009 1591 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 POLR3AO14802 1390 aaPredicted RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 EPRSP07814 1512 aaKnown RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 FAM135AQ9P2D6 1515 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 ZNF521Q96K83 1311 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 PASKQ96RG2 1323 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 HECW1Q76N89 1606 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 A0A1W2PPW3 197 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 TMEM120BA0PK00 339 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 ERVV-1B6SEH8 477 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 F8W036 122 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 APAF1O14727 1248 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 CCDC22O60826 627 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 RFPL1O75677 317 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 PPM1BO75688 479 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 CDK14O94921 469 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 APOL3O95236 402 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 DEXIO95424 95 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 CRYABP02511 175 aaKnown RBP6.29□□□□□ -1.4
TDP1-215ENST00000556498 PAEPP09466 180 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 ICAM2P13598 275 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 FDPSP14324 419 aaKnown RBP6.29□□□□□ -1.4
TDP1-215ENST00000556498 DARSP14868 501 aaKnown RBP6.29□□□□□ -1.4
TDP1-215ENST00000556498 ALDH4A1P30038 563 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 PCGF2P35227 344 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 RFC2P35250 354 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 ADMP35318 185 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 GRK6P43250 576 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 HCAR3P49019 387 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 YWHAZP63104 245 aaKnown RBP6.29□□□□□ -1.4
TDP1-215ENST00000556498 RPP30P78346 268 aaKnown RBP6.29□□□□□ -1.4
TDP1-215ENST00000556498 DLG4P78352 724 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 IFRD2Q12894 506 aaPredicted RBP6.29□□□□□ -1.4
TDP1-215ENST00000556498 SLC14A1Q13336 389 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 MEA1Q16626 185 aa6.29□□□□□ -1.4
TDP1-215ENST00000556498 DUSP7Q16829 419 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms