RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 DNAAF2Q9NVR5 837 aaKnown RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 MYRFQ9Y2G1 1151 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 PCDHB1Q9Y5F3 818 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 MYL12BO14950 172 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 DGKIO75912 1065 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 FAM163BP0C2L3 166 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 TARSP26639 723 aaKnown RBP10.86□□□□□ -0.67
ACTN1-216ENST00000556083 SEC24CP53992 1094 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 RGS1Q08116 209 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 PTGES3Q15185 160 aaKnown RBP10.86□□□□□ -0.67
ACTN1-216ENST00000556083 HYIQ5T013 277 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 TATDN1Q6P1N9 297 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 WDR59Q6PJI9 974 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 MACC1Q6ZN28 852 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 RFX8Q6ZV50 586 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 NECAB2Q7Z6G3 386 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 ZNF605Q86T29 641 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 FAM228AQ86W67 206 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 FIBCD1Q8N539 461 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 SHC3Q92529 594 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 KAZALD1Q96I82 304 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 TKTL2Q9H0I9 626 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 ARL15Q9NXU5 204 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 CRNNQ9UBG3 495 aaPredicted RBP10.86□□□□□ -0.67
ACTN1-216ENST00000556083 C3orf18Q9UK00 162 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 FBXO10Q9UK96 956 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 RAB23Q9ULC3 237 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 H3BNH8 94 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 HIST1H2ABP04908 130 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 TNK2Q07912 1038 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 POU6F1Q14863 301 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 CBWD6Q4V339 395 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 SLC44A4Q53GD3 710 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 TRIQKQ629K1 86 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 HIST3H2AQ7L7L0 130 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 ZNF614Q8N883 585 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 SLC22A17Q8WUG5 538 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 GLMNQ92990 594 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 HIST1H2ACQ93077 130 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 ADAM2Q99965 735 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 HGH1Q9BTY7 390 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 ETNK2Q9NVF9 386 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 SLC9A8Q9Y2E8 581 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 SPATA31C2B4DYI2 1134 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 DNAJA2O60884 412 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 BAIAP3O94812 1187 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 VAPBO95292 243 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 ADH1CP00326 375 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 PECAM1P16284 738 aaPredicted RBP10.86□□□□□ -0.67
ACTN1-216ENST00000556083 UBA1P22314 1058 aaKnown RBP10.86□□□□□ -0.67
ACTN1-216ENST00000556083 LRRC36Q1X8D7 754 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 PAN2Q504Q3 1202 aaKnown RBP10.86□□□□□ -0.67
ACTN1-216ENST00000556083 PIWIL2Q8TC59 973 aaKnown RBP10.86□□□□□ -0.67
ACTN1-216ENST00000556083 FNIP1Q8TF40 1166 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 C2orf15Q8WU43 125 aaKnown RBP10.86□□□□□ -0.67
ACTN1-216ENST00000556083 ACSF2Q96CM8 615 aaPredicted RBP10.86□□□□□ -0.67
ACTN1-216ENST00000556083 ULBP1Q9BZM6 244 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 TRIM8Q9BZR9 551 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 OR12D3Q9UGF7 316 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 ANAPC2Q9UJX6 822 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 KCNE2Q9Y6J6 123 aa10.86□□□□□ -0.67
ACTN1-216ENST00000556083 CLOCKO15516 846 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 SNAP91O60641 907 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 SERPINB7O75635 380 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 BCL10O95999 233 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 ACAT1P24752 427 aaKnown RBP10.85□□□□□ -0.67
ACTN1-216ENST00000556083 C2CD6Q53TS8 623 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 COLGALT2Q8IYK4 626 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 ITFG1Q8TB96 612 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 SLC38A2Q96QD8 506 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 PIGUQ9H490 435 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 NINJ2Q9NZG7 142 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 TAF4O00268 1085 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 DDX3XO00571 662 aaKnown RBP eCLIP10.85□□□□□ -0.67
ACTN1-216ENST00000556083 FCHO1O14526 889 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 ITGAXP20702 1163 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 PSMD4P55036 377 aaKnown RBP10.85□□□□□ -0.67
ACTN1-216ENST00000556083 BIKQ13323 160 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 AMHR2Q16671 573 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 FUT11Q495W5 492 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 ARMC3Q5W041 872 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 TRIM40Q6P9F5 258 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 MFSD7Q6UXD7 560 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 MTDHQ86UE4 582 aaKnown RBP10.85□□□□□ -0.67
ACTN1-216ENST00000556083 EPHX4Q8IUS5 362 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 RBFAQ8N0V3 343 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 CAMKK1Q8N5S9 505 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 EMC1Q8N766 993 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 TATDN2Q93075 761 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 PPP1R14AQ96A00 147 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 LACRTQ9GZZ8 138 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 ST6GALNAC4Q9H4F1 302 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 GPATCH2LQ9NWQ4 482 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 PRKAG3Q9UGI9 489 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 PRPF19Q9UMS4 504 aaKnown RBP10.85□□□□□ -0.67
ACTN1-216ENST00000556083 FAM86B1E9PN63 330 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 BTN3A1O00481 513 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 KPNA3O00505 521 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-216ENST00000556083 CLDN11O75508 207 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 FAM86B2P0C5J1 330 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms