RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 SAP30BPQ9UHR5 308 aaKnown RBP4.59□□□□□ -1.67
ATXN3-227ENST00000554491 TMPRSS11EQ9UL52 423 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 VANGL2Q9ULK5 521 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 NOB1Q9ULX3 412 aaKnown RBP4.59□□□□□ -1.67
ATXN3-227ENST00000554491 L1RE1Q9UN81 338 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 TMEM5Q9Y2B1 443 aa4.59□□□□□ -1.67
ATXN3-227ENST00000554491 MAGED1Q9Y5V3 778 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-227ENST00000554491 DOCK3Q8IZD9 2030 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 A0A1B0GUL6 1792 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 LRRC37A2A6NM11 1700 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 CCL15-CCL14A0A0B4J2E2 113 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 KANSL1LA0AUZ9 987 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 ARHGAP10A1A4S6 786 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 BTBD19C9JJ37 291 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 GOLGA8KD6RF30 607 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 H3BQF6 201 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 GOLGA8TH3BQL2 631 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 GOLGA8MH3BSY2 632 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 TOR1BO14657 336 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 APOL1O14791 398 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 HDAC3O15379 428 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 NCAM2O15394 837 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 XPOTO43592 962 aaKnown RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 ACSL4O60488 711 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 RANBP6O60518 1105 aaKnown RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 KATNA1O75449 491 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 FGF18O76093 207 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 GOLGA8HP0CJ92 632 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 DLATP10515 647 aaKnown RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 TOP1P11387 765 aaKnown RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 MTHFD1P11586 935 aaKnown RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 SLC5A1P13866 664 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 DDX5P17844 614 aaKnown RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 TBXAS1P24557 533 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 CTGFP29279 349 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 HMOX2P30519 316 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 LSP1P33241 339 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 STT3AP46977 705 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 CCT5P48643 541 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 AARSP49588 968 aaKnown RBP eCLIP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 PLCD1P51178 756 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 RPP38P78345 283 aaKnown RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 S100A12P80511 92 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 PPARAQ07869 468 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 DNAJC3Q13217 504 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 MTX1Q13505 466 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 CUL1Q13616 776 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 TP53BP2Q13625 1128 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 CCL15Q16663 113 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 Q3ZCU0 254 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 FUT11Q495W5 492 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 HSP90AA5PQ58FG0 334 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 ERAP2Q6P179 960 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 FBXO42Q6P3S6 717 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 KSR2Q6VAB6 950 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 RANBP10Q6VN20 620 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 ZNF704Q6ZNC4 412 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 RD3Q7Z3Z2 195 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 FAM228AQ86W67 206 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 KIF18BQ86Y91 864 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 HOMER1Q86YM7 354 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 PLXDC1Q8IUK5 500 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 RAVER1Q8IY67 606 aaKnown RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 OR7G1Q8NGA0 311 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 SLC22A8Q8TCC7 542 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 OSCP1Q8WVF1 389 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 LINC00476Q8WZB0 136 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 FATE1Q969F0 183 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 DHX58Q96C10 678 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 C11orf24Q96F05 449 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 NSMCE3Q96MG7 304 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 NLRP4Q96MN2 994 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 DEFB118Q96PH6 123 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 ADAM2Q99965 735 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 GAL3ST1Q99999 423 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 GPATCH1Q9BRR8 931 aaKnown RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 RIOK1Q9BRS2 568 aaKnown RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 ISCA1Q9BUE6 129 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 NAT10Q9H0A0 1025 aaKnown RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 INTS2Q9H0H0 1204 aaKnown RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 ZCWPW1Q9H0M4 648 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 TTYH1Q9H313 450 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 VIPAS39Q9H9C1 493 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 PFDN4Q9NQP4 134 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 LUZP4Q9P127 313 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 KIF17Q9P2E2 1029 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 SEC63Q9UGP8 760 aaKnown RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 EDARQ9UNE0 448 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 MAP3K2Q9Y2U5 619 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 RRP7AQ9Y3A4 280 aaKnown RBP4.58□□□□□ -1.68
ATXN3-227ENST00000554491 COX11Q9Y6N1 276 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 PTPRFP10586 1907 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 MYH3P11055 1940 aa4.58□□□□□ -1.68
ATXN3-227ENST00000554491 ZDBF2Q9HCK1 2354 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 TTC41PQ6P2S7 1318 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 ANO9A1A5B4 782 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 GOLGA8IPA6NC78 632 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 A8MVJ9 347 aa4.57□□□□□ -1.68
ATXN3-227ENST00000554491 PI4K2BG5E9Z4 385 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms