RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 HDDC3Q8N4P3 179 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 NETO2Q8NC67 525 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 ZNF419Q96HQ0 510 aaPredicted RBP23.72■■□□□ 1.39
NEK9-203ENST00000553945 CSPG4P5Q96PW8 444 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 SLC39A8Q9C0K1 460 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 SMOC1Q9H4F8 434 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 VPS45Q9NRW7 570 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 SERGEFQ9UGK8 458 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 SARDHQ9UL12 918 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 DMXL1Q9Y485 3027 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 NUP205Q92621 2012 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 ATXN2Q99700 1313 aaKnown RBP23.71■■□□□ 1.39
NEK9-203ENST00000553945 ZNF821O75541 412 aaPredicted RBP23.71■■□□□ 1.39
NEK9-203ENST00000553945 NDUFA10O95299 355 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 CHRNA3P32297 505 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 NOP2P46087 812 aaKnown RBP23.71■■□□□ 1.39
NEK9-203ENST00000553945 TCEAL1Q15170 157 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 POM121L1PQ3SYA9 428 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 ATP13A4Q4VNC1 1196 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 PLA2G2CQ5R387 149 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 FAM46CQ5VWP2 391 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 AADATQ8N5Z0 425 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 CHST14Q8NCH0 376 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 PIP4K2CQ8TBX8 421 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 FOXJ1Q92949 421 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 BAG1Q99933 345 aaPredicted RBP23.71■■□□□ 1.39
NEK9-203ENST00000553945 TM6SF2Q9BZW4 377 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 KLHL11Q9NVR0 708 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 PPM1HQ9ULR3 514 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 TFR2Q9UP52 801 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 EP300Q09472 2414 aaPredicted RBP23.71■■□□□ 1.39
NEK9-203ENST00000553945 FAM186AA6NE01 2351 aa23.71■■□□□ 1.39
NEK9-203ENST00000553945 ARHGAP42A6NI28 874 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 MEI4A8MW99 385 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 GOLGA6L6A8MZA4 724 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 IPO7O95373 1038 aaKnown RBP23.7■■□□□ 1.38
NEK9-203ENST00000553945 SEMA4FO95754 770 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 KRT7P08729 469 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 CD48P09326 243 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 ZNF806P0C7X5 589 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 PAPOLAP51003 745 aaKnown RBP23.7■■□□□ 1.38
NEK9-203ENST00000553945 METAP1P53582 386 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 SF3A2Q15428 464 aaKnown RBP23.7■■□□□ 1.38
NEK9-203ENST00000553945 CARD16Q5EG05 197 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 ZFYVE27Q5T4F4 411 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 SYCP2LQ5T4T6 812 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 RAD9BQ6WBX8 426 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 DPY19L3Q6ZPD9 716 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 SYT12Q8IV01 421 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 ARHGAP12Q8IWW6 846 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 RGL4Q8IZJ4 473 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 NPWQ8N729 165 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 KCTD6Q8NC69 237 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 CADM4Q8NFZ8 388 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 TSC1Q92574 1164 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 ISG20Q96AZ6 181 aaKnown RBP23.7■■□□□ 1.38
NEK9-203ENST00000553945 NEUROG2Q9H2A3 272 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 SGK2Q9HBY8 427 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 IL36AQ9UHA7 158 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 FZD4Q9ULV1 537 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 MFHAS1Q9Y4C4 1052 aa23.7■■□□□ 1.38
NEK9-203ENST00000553945 DFFAO00273 331 aa23.69■■□□□ 1.38
NEK9-203ENST00000553945 TMCC1O94876 653 aa23.69■■□□□ 1.38
NEK9-203ENST00000553945 CTSLP07711 333 aa23.69■■□□□ 1.38
NEK9-203ENST00000553945 MMRN1Q13201 1228 aa23.69■■□□□ 1.38
NEK9-203ENST00000553945 ARSIQ5FYB1 569 aa23.69■■□□□ 1.38
NEK9-203ENST00000553945 AFMIDQ63HM1 303 aa23.69■■□□□ 1.38
NEK9-203ENST00000553945 TMCO3Q6UWJ1 677 aa23.69■■□□□ 1.38
NEK9-203ENST00000553945 PRR23CQ6ZRP0 262 aa23.69■■□□□ 1.38
NEK9-203ENST00000553945 RYBPQ8N488 228 aaPredicted RBP23.69■■□□□ 1.38
NEK9-203ENST00000553945 LZTR1Q8N653 840 aa23.69■■□□□ 1.38
NEK9-203ENST00000553945 C12orf50Q8NA57 414 aaPredicted RBP23.69■■□□□ 1.38
NEK9-203ENST00000553945 GRIN3AQ8TCU5 1115 aa23.69■■□□□ 1.38
NEK9-203ENST00000553945 CALN1Q9BXU9 219 aa23.69■■□□□ 1.38
NEK9-203ENST00000553945 C6orf106Q9H6K1 298 aaPredicted RBP23.69■■□□□ 1.38
NEK9-203ENST00000553945 TMEM74BQ9NUR3 256 aa23.69■■□□□ 1.38
NEK9-203ENST00000553945 ETNK2Q9NVF9 386 aa23.69■■□□□ 1.38
NEK9-203ENST00000553945 RCOR3Q9P2K3 495 aaPredicted RBP23.69■■□□□ 1.38
NEK9-203ENST00000553945 PILRBQ9UKJ0 227 aa23.69■■□□□ 1.38
NEK9-203ENST00000553945 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.69■■□□□ 1.38
NEK9-203ENST00000553945 FAM47DPA6NHR8 397 aa23.68■■□□□ 1.38
NEK9-203ENST00000553945 J3KR12 359 aa23.68■■□□□ 1.38
NEK9-203ENST00000553945 PLK4O00444 970 aa23.68■■□□□ 1.38
NEK9-203ENST00000553945 KPNA3O00505 521 aaPredicted RBP23.68■■□□□ 1.38
NEK9-203ENST00000553945 PRNPP04156 253 aa23.68■■□□□ 1.38
NEK9-203ENST00000553945 DRD3P35462 400 aa23.68■■□□□ 1.38
NEK9-203ENST00000553945 DPP6P42658 865 aa23.68■■□□□ 1.38
NEK9-203ENST00000553945 ARSEP51690 589 aa23.68■■□□□ 1.38
NEK9-203ENST00000553945 CCNHP51946 323 aaPredicted RBP23.68■■□□□ 1.38
NEK9-203ENST00000553945 INO80DQ53TQ3 878 aaPredicted RBP23.68■■□□□ 1.38
NEK9-203ENST00000553945 DCAF12L1Q5VU92 463 aa23.68■■□□□ 1.38
NEK9-203ENST00000553945 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.68■■□□□ 1.38
NEK9-203ENST00000553945 TMIEQ8NEW7 156 aa23.68■■□□□ 1.38
NEK9-203ENST00000553945 FAM71BQ8TC56 605 aa23.68■■□□□ 1.38
NEK9-203ENST00000553945 CASKIN2Q8WXE0 1202 aa23.68■■□□□ 1.38
NEK9-203ENST00000553945 PCED1AQ9H1Q7 454 aa23.68■■□□□ 1.38
NEK9-203ENST00000553945 HECAQ9UBI9 543 aaPredicted RBP23.68■■□□□ 1.38
NEK9-203ENST00000553945 UBA2Q9UBT2 640 aaPredicted RBP23.68■■□□□ 1.38
NEK9-203ENST00000553945 METTL12A8MUP2 240 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 PATE3B3GLJ2 98 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms