RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 VOPP1Q96AW1 172 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 ISG20Q96AZ6 181 aaKnown RBP18.37■□□□□ 0.53
PSEN1-208ENST00000553719 CAPZA3Q96KX2 299 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 IL12RB2Q99665 862 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 CEP44Q9C0F1 390 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 LMAN1LQ9HAT1 526 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 USP29Q9HBJ7 922 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 DLGAP2Q9P1A6 1054 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 CDC23Q9UJX2 597 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 ATG2BQ96BY7 2078 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 TMEM221A6NGB7 291 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 M0R296 226 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 PRKCHP24723 683 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 TIE1P35590 1138 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 WASHC5Q12768 1159 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 LBRQ14739 615 aaKnown RBP18.36■□□□□ 0.53
PSEN1-208ENST00000553719 E2F5Q15329 346 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 HNRNPA1L2Q32P51 320 aaKnown RBP18.36■□□□□ 0.53
PSEN1-208ENST00000553719 C22orf39Q6P5X5 142 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 B4GALNT4Q76KP1 1039 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 METTL3Q86U44 580 aaKnown RBP18.36■□□□□ 0.53
PSEN1-208ENST00000553719 CDKL3Q8IVW4 592 aaPredicted RBP18.36■□□□□ 0.53
PSEN1-208ENST00000553719 ALLCQ8N6M5 410 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 CCNYQ8ND76 341 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 KIF18AQ8NI77 898 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 PSKH2Q96QS6 385 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 COL25A1Q9BXS0 654 aaPredicted RBP18.36■□□□□ 0.53
PSEN1-208ENST00000553719 CHRDQ9H2X0 955 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 C10orf88Q9H8K7 445 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 CACNA2D2Q9NY47 1150 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 LHX3Q9UBR4 397 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 PLA2G4CQ9UP65 541 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 FCF1Q9Y324 198 aaKnown RBP18.36■□□□□ 0.53
PSEN1-208ENST00000553719 STON1Q9Y6Q2 735 aa18.36■□□□□ 0.53
PSEN1-208ENST00000553719 TTC34A8MYJ7 566 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 WASH3PC4AMC7 463 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 KCNK1O00180 336 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 MUSKO15146 869 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 C7P10643 843 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 CCNB1P14635 433 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 RBL1P28749 1068 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 NTSR1P30989 418 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 AP1B1Q10567 949 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 BYSLQ13895 437 aaKnown RBP18.35■□□□□ 0.53
PSEN1-208ENST00000553719 DLG2Q15700 870 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 FNDC3BQ53EP0 1204 aaKnown RBP18.35■□□□□ 0.53
PSEN1-208ENST00000553719 C2orf27AQ580R0 203 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 ALG1LQ6GMV1 187 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 TTC27Q6P3X3 843 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 TRMT11Q7Z4G4 463 aaKnown RBP18.35■□□□□ 0.53
PSEN1-208ENST00000553719 PGBD5Q8N414 524 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 CNTD1Q8N815 330 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 ATP11CQ8NB49 1132 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 RPLP0P6Q8NHW5 317 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 HTR3CQ8WXA8 447 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 ZNF592Q92610 1267 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 PTPRN2Q92932 1015 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 RTP4Q96DX8 246 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 AP1M1Q9BXS5 423 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 HOMER3Q9NSC5 361 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 AMACRQ9UHK6 382 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 MRFAP1Q9Y605 127 aa18.35■□□□□ 0.53
PSEN1-208ENST00000553719 H7C0C1 242 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 SGK1O00141 431 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 KRIT1O00522 736 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 ITGAVP06756 1048 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 HLA-EP13747 358 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 AOC1P19801 751 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 CR2P20023 1033 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 PTPN3P26045 913 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 ATP5OP48047 213 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 GDF10P55107 478 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 ST8SIA6P61647 398 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 SERPINA13PQ6UXR4 307 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 PLPP6Q8IY26 295 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 CHPFQ8IZ52 775 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 PCDH20Q8N6Y1 951 aaKnown RBP18.34■□□□□ 0.53
PSEN1-208ENST00000553719 ZNF366Q8N895 744 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 TSEN2Q8NCE0 465 aaKnown RBP18.34■□□□□ 0.53
PSEN1-208ENST00000553719 MGME1Q9BQP7 344 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 SEPT3Q9UH03 358 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 MMP17Q9ULZ9 603 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 DRG1Q9Y295 367 aaKnown RBP18.34■□□□□ 0.53
PSEN1-208ENST00000553719 ATP8A1Q9Y2Q0 1164 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 SIT1Q9Y3P8 196 aa18.34■□□□□ 0.53
PSEN1-208ENST00000553719 ZDBF2Q9HCK1 2354 aa18.33■□□□□ 0.53
PSEN1-208ENST00000553719 A0A1W2PQF6 199 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 CFAP69A5D8W1 941 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 TNFRSF10AO00220 468 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 MTSS1O43312 755 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 PHF2O75151 1096 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 ZNF189O75820 626 aaPredicted RBP18.33■□□□□ 0.52
PSEN1-208ENST00000553719 URI1O94763 535 aaPredicted RBP18.33■□□□□ 0.52
PSEN1-208ENST00000553719 KLF8O95600 359 aaPredicted RBP18.33■□□□□ 0.52
PSEN1-208ENST00000553719 GSRP00390 522 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 HLA-DQB2P05538 268 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 MMP13P45452 471 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 RGRP47804 291 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 RENBPP51606 427 aa18.33■□□□□ 0.52
PSEN1-208ENST00000553719 CAMK2GQ13555 558 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms