RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 SERPINI2O75830 405 aa9.14□□□□□ -0.95
NECAP1-207ENST00000544891 PPP3CAQ08209 521 aa9.14□□□□□ -0.95
NECAP1-207ENST00000544891 MTM1Q13496 603 aa9.14□□□□□ -0.95
NECAP1-207ENST00000544891 CBWD6Q4V339 395 aa9.14□□□□□ -0.95
NECAP1-207ENST00000544891 IRAK1BP1Q5VVH5 260 aa9.14□□□□□ -0.95
NECAP1-207ENST00000544891 SMYD5Q6GMV2 418 aa9.14□□□□□ -0.95
NECAP1-207ENST00000544891 FNDC5Q8NAU1 212 aa9.14□□□□□ -0.95
NECAP1-207ENST00000544891 HJURPQ8NCD3 748 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-207ENST00000544891 SPPL2BQ8TCT7 592 aa9.14□□□□□ -0.95
NECAP1-207ENST00000544891 CKAP2Q8WWK9 683 aa9.14□□□□□ -0.95
NECAP1-207ENST00000544891 BBS2Q9BXC9 721 aa9.14□□□□□ -0.95
NECAP1-207ENST00000544891 ZYG11BQ9C0D3 744 aa9.14□□□□□ -0.95
NECAP1-207ENST00000544891 CDT1Q9H211 546 aa9.14□□□□□ -0.95
NECAP1-207ENST00000544891 MID1IP1Q9NPA3 183 aa9.14□□□□□ -0.95
NECAP1-207ENST00000544891 AKAP7Q9P0M2 348 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-207ENST00000544891 OR12D3Q9UGF7 316 aa9.14□□□□□ -0.95
NECAP1-207ENST00000544891 GNPTGQ9UJJ9 305 aa9.14□□□□□ -0.95
NECAP1-207ENST00000544891 E2F8A0AVK6 867 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 WDR27A2RRH5 827 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 C1QTNF3-AMACRE9PGA6 284 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 PPIBP23284 216 aaKnown RBP9.13□□□□□ -0.95
NECAP1-207ENST00000544891 CNTN2Q02246 1040 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 BMPR2Q13873 1038 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 PLCL1Q15111 1095 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 CCDC142Q17RM4 750 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 PGS1Q32NB8 556 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 INTS6LQ5JSJ4 861 aaKnown RBP9.13□□□□□ -0.95
NECAP1-207ENST00000544891 STXBP5Q5T5C0 1151 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 PPP4R4Q6NUP7 873 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 TRMT11Q7Z4G4 463 aaKnown RBP9.13□□□□□ -0.95
NECAP1-207ENST00000544891 SCUBE3Q8IX30 993 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 C10orf53Q8N6V4 93 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 FNIP1Q8TF40 1166 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 MFSD14AQ96MC6 490 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 MRPS26Q9BYN8 205 aaKnown RBP9.13□□□□□ -0.95
NECAP1-207ENST00000544891 C8orf4Q9NR00 106 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 MRPL17Q9NRX2 175 aaKnown RBP9.13□□□□□ -0.95
NECAP1-207ENST00000544891 MYH1P12882 1939 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 TRAV19A0A0A6YYK7 116 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 ANKRD63C9JTQ0 380 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 TRAFD1O14545 582 aaPredicted RBP9.13□□□□□ -0.95
NECAP1-207ENST00000544891 TRIM24O15164 1050 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 PCNAP12004 261 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 ATP6V1B2P21281 511 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 PIK3R1P27986 724 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 RBL1P28749 1068 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 MAGEA10P43363 369 aaPredicted RBP9.13□□□□□ -0.95
NECAP1-207ENST00000544891 DDR2Q16832 855 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 TRIM71Q2Q1W2 868 aaKnown RBP9.13□□□□□ -0.95
NECAP1-207ENST00000544891 TTC23Q5W5X9 447 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 DEFB132Q7Z7B7 95 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 ADHFE1Q8IWW8 467 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 ALLCQ8N6M5 410 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 CELF6Q96J87 481 aaKnown RBP9.13□□□□□ -0.95
NECAP1-207ENST00000544891 INPP4AQ96PE3 977 aaPredicted RBP9.13□□□□□ -0.95
NECAP1-207ENST00000544891 GAD1Q99259 594 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 EPB41L4BQ9H329 900 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 BTBD7Q9P203 1132 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.13□□□□□ -0.95
NECAP1-207ENST00000544891 MFHAS1Q9Y4C4 1052 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 A0A087WXM4 84 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 LIASO43766 372 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 MAGEC1O60732 1142 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 BAIAP3O94812 1187 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 PCDH8O95206 1070 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 CPSF4O95639 269 aaKnown RBP9.13□□□□□ -0.95
NECAP1-207ENST00000544891 ZNF682O95780 498 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 FGF1P05230 155 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 AKAP5P24588 427 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 ALDH6A1Q02252 535 aaKnown RBP9.13□□□□□ -0.95
NECAP1-207ENST00000544891 FUT11Q495W5 492 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 NEK5Q6P3R8 708 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 C11orf88Q6PI97 169 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 SH3BP5LQ7L8J4 393 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 C11orf96Q7Z7L8 435 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 ZNF384Q8TF68 577 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 SERAC1Q96JX3 654 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 MLPHQ9BV36 600 aaPredicted RBP9.13□□□□□ -0.95
NECAP1-207ENST00000544891 FAIM2Q9BWQ8 316 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 OSBPL10Q9BXB5 764 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 ATP13A3Q9H7F0 1226 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 DDX20Q9UHI6 824 aaKnown RBP9.13□□□□□ -0.95
NECAP1-207ENST00000544891 TCHHQ07283 1943 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 CENPXA8MT69 81 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 B4GALT4O60513 344 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 UBTFL6P0CB48 400 aaPredicted RBP9.13□□□□□ -0.95
NECAP1-207ENST00000544891 SSTR1P30872 391 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 TMED10P49755 219 aaKnown RBP9.13□□□□□ -0.95
NECAP1-207ENST00000544891 NOGQ13253 232 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 VGLL4Q14135 290 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 SLC39A12Q504Y0 691 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 HLA-DQA1Q5Y7H0 255 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 CDC73Q6P1J9 531 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 CASP12Q6UXS9 341 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 CCDC81Q6ZN84 652 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 CSGALNACT1Q8TDX6 532 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 CERS2Q96G23 380 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 FAM192AQ9GZU8 254 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 ACSS3Q9H6R3 686 aa9.13□□□□□ -0.95
NECAP1-207ENST00000544891 TRPC4Q9UBN4 977 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms