RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 IL12RB1P42701 662 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 RPS9P46781 194 aaKnown RBP13.33□□□□□ -0.28
DDX11-227ENST00000544652 STK19P49842 368 aaPredicted RBP13.33□□□□□ -0.28
DDX11-227ENST00000544652 EIF3EP60228 445 aaKnown RBP13.33□□□□□ -0.28
DDX11-227ENST00000544652 IFI35P80217 286 aaPredicted RBP13.33□□□□□ -0.28
DDX11-227ENST00000544652 HNRNPDQ14103 355 aaKnown RBP13.33□□□□□ -0.28
DDX11-227ENST00000544652 UBXN2BQ14CS0 331 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 OASLQ15646 514 aaKnown RBP13.33□□□□□ -0.28
DDX11-227ENST00000544652 SLC45A4Q5BKX6 768 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 TMCO4Q5TGY1 634 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 CWF19L1Q69YN2 538 aaKnown RBP13.33□□□□□ -0.28
DDX11-227ENST00000544652 LINGO4Q6UY18 593 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 ADAT2Q7Z6V5 191 aaKnown RBP13.33□□□□□ -0.28
DDX11-227ENST00000544652 ZC3H18Q86VM9 953 aaKnown RBP13.33□□□□□ -0.28
DDX11-227ENST00000544652 ZNF354CQ86Y25 554 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 PRELID2Q8N945 189 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 C12orf50Q8NA57 414 aaPredicted RBP13.33□□□□□ -0.28
DDX11-227ENST00000544652 FRS2Q8WU20 508 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 ISG20Q96AZ6 181 aaKnown RBP13.33□□□□□ -0.28
DDX11-227ENST00000544652 ACOX2Q99424 681 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 IL12RB2Q99665 862 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 GABRG3Q99928 467 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 CEP44Q9C0F1 390 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 LMAN1LQ9HAT1 526 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 HOMER3Q9NSC5 361 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 RBM12Q9NTZ6 932 aaKnown RBP13.33□□□□□ -0.28
DDX11-227ENST00000544652 UBA2Q9UBT2 640 aaPredicted RBP13.33□□□□□ -0.28
DDX11-227ENST00000544652 SLCO3A1Q9UIG8 710 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 CDC23Q9UJX2 597 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 DNPEPQ9ULA0 475 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 PLA2G4CQ9UP65 541 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 ACTL7AQ9Y615 435 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 MYLKQ15746 1914 aa13.33□□□□□ -0.28
DDX11-227ENST00000544652 TMEM221A6NGB7 291 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 K7ERQ8 282 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 M0R296 226 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 PDE2AO00408 941 aaPredicted RBP13.32□□□□□ -0.28
DDX11-227ENST00000544652 MCF2LO15068 1137 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 MTSS1O43312 755 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 SMAD6O43541 496 aaKnown RBP13.32□□□□□ -0.28
DDX11-227ENST00000544652 ZNF189O75820 626 aaPredicted RBP13.32□□□□□ -0.28
DDX11-227ENST00000544652 NNMTP40261 264 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 PAFAH1B1P43034 410 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 RENBPP51606 427 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 SEC13P55735 322 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 SLC10A7Q0GE19 358 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 AP1B1Q10567 949 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 TUBB2AQ13885 445 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 LBRQ14739 615 aaKnown RBP13.32□□□□□ -0.28
DDX11-227ENST00000544652 CYTH1Q15438 398 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 ZNF572Q7Z3I7 529 aaPredicted RBP13.32□□□□□ -0.28
DDX11-227ENST00000544652 TRMT11Q7Z4G4 463 aaKnown RBP13.32□□□□□ -0.28
DDX11-227ENST00000544652 CDKL3Q8IVW4 592 aaPredicted RBP13.32□□□□□ -0.28
DDX11-227ENST00000544652 IL17RCQ8NAC3 791 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 CCNYQ8ND76 341 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 LRRN4Q8WUT4 740 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 ATG4AQ8WYN0 398 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 ZNF592Q92610 1267 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 ZNF419Q96HQ0 510 aaPredicted RBP13.32□□□□□ -0.28
DDX11-227ENST00000544652 CAPZA3Q96KX2 299 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 FAM118BQ9BPY3 351 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 TUBB2BQ9BVA1 445 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 USP29Q9HBJ7 922 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 SMARCAL1Q9NZC9 954 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 AMACRQ9UHK6 382 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 DRG1Q9Y295 367 aaKnown RBP13.32□□□□□ -0.28
DDX11-227ENST00000544652 STON1Q9Y6Q2 735 aa13.32□□□□□ -0.28
DDX11-227ENST00000544652 H7C0C1 242 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 ADAM23O75077 832 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 URI1O94763 535 aaPredicted RBP13.31□□□□□ -0.28
DDX11-227ENST00000544652 TMCC1O94876 653 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 PDGFBP01127 241 aaPredicted RBP13.31□□□□□ -0.28
DDX11-227ENST00000544652 ITGAVP06756 1048 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 C7P10643 843 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 CCNB1P14635 433 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 PRKCHP24723 683 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 RBL1P28749 1068 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 NTSR1P30989 418 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 MAGEA9P43362 315 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 ATP5OP48047 213 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 ST8SIA6P61647 398 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 WASHC5Q12768 1159 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 BYSLQ13895 437 aaKnown RBP13.31□□□□□ -0.28
DDX11-227ENST00000544652 GAS6Q14393 721 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 DLG2Q15700 870 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 HNRNPA1L2Q32P51 320 aaKnown RBP13.31□□□□□ -0.28
DDX11-227ENST00000544652 C2orf27AQ580R0 203 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 MARC1Q5VT66 337 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 HEATR6Q6AI08 1181 aaKnown RBP13.31□□□□□ -0.28
DDX11-227ENST00000544652 C22orf39Q6P5X5 142 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 LEKR1Q6ZMV7 388 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 BMP8AQ7Z5Y6 402 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 ALLCQ8N6M5 410 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 PCDH20Q8N6Y1 951 aaKnown RBP13.31□□□□□ -0.28
DDX11-227ENST00000544652 ATP11CQ8NB49 1132 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 RPLP0P6Q8NHW5 317 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 C1orf54Q8WWF1 131 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 HTR3CQ8WXA8 447 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 PTPRN2Q92932 1015 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 PSKH2Q96QS6 385 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms