RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 SFSWAPQ12872 951 aaKnown RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 RFTN1Q14699 578 aaPredicted RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 LBRQ14739 615 aaKnown RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 PDK1Q15118 436 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 PPP2R5EQ16537 467 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 HNRNPA1L2Q32P51 320 aaKnown RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 TTC31Q49AM3 519 aaPredicted RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 USP39Q53GS9 565 aaKnown RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 INO80DQ53TQ3 878 aaPredicted RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 CARD16Q5EG05 197 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 ARTNQ5T4W7 220 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 CFAP58Q5T655 872 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 TMCO4Q5TGY1 634 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 MARC1Q5VT66 337 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 ZNF776Q68DI1 518 aaPredicted RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 SLC9A4Q6AI14 798 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 KIAA1211LQ6NV74 962 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 AADACL2Q6P093 401 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 ARHGAP36Q6ZRI8 547 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 ADAT2Q7Z6V5 191 aaKnown RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 ZC3H18Q86VM9 953 aaKnown RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 TMPRSS6Q8IU80 811 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 LRRC49Q8IUZ0 686 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 MMAAQ8IVH4 418 aaKnown RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 ARHGAP12Q8IWW6 846 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 TP53INP2Q8IXH6 220 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 CCDC13Q8IYE1 715 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 STK40Q8N2I9 435 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 CAMKK1Q8N5S9 505 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 PCDH20Q8N6Y1 951 aaKnown RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 PQLC3Q8N755 202 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 PLD5Q8N7P1 536 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 LRRN4Q8WUT4 740 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 ALG3Q92685 438 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 SIPA1Q96FS4 1042 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 EXOC2Q96KP1 924 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 SPACA7Q96KW9 195 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 GDAP1L1Q96MZ0 367 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 CEP44Q9C0F1 390 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 KLC2Q9H0B6 622 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 SLC6A17Q9H1V8 727 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 TMEM245Q9H330 911 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 NOL6Q9H6R4 1146 aaKnown RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 ZDHHC6Q9H6R6 413 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 FBRSQ9HAH7 460 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 PRSS16Q9NQE7 514 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 C2orf42Q9NWW7 574 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 DTLQ9NZJ0 730 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 HECAQ9UBI9 543 aaPredicted RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 SEPT3Q9UH03 358 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 FBXO4Q9UKT5 387 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 HCN2Q9UL51 889 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 HS3ST2Q9Y278 367 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 NCKAP1Q9Y2A7 1128 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 JRKLQ9Y4A0 524 aa6.43□□□□□ -1.38
LTBR-212ENST00000543542 MUC22E2RYF6 1773 aaPredicted RBP6.43□□□□□ -1.38
LTBR-212ENST00000543542 NUP205Q92621 2012 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 A0A1W2PQF6 199 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 APOC4-APOC2K7ER74 178 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 KPNA3O00505 521 aaPredicted RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 MCF2LO15068 1137 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 MATN3O15232 486 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 NDUFS2O75306 463 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 RNASEH2AO75792 299 aaKnown RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 ZMPSTE24O75844 475 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 STK10O94804 968 aaKnown RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 ADH1BP00325 375 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 GSRP00390 522 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 APOC2P02655 101 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 PRNPP04156 253 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 SP9P0CG40 484 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 PECAM1P16284 738 aaPredicted RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 GABRG2P18507 467 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 NDUFV2P19404 249 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 XPAP23025 273 aaPredicted RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 CCNCP24863 283 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 CHRNA3P32297 505 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 CXCR5P32302 372 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 MMP13P45452 471 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 SCNN1BP51168 640 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 CCNHP51946 323 aaPredicted RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 EIF3EP60228 445 aaKnown RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 GALNT2Q10471 571 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 CAMK2GQ13555 558 aaPredicted RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 ENPP2Q13822 863 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 BYSLQ13895 437 aaKnown RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 ELAVL3Q14576 367 aaKnown RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 LONRF2Q1L5Z9 754 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 POM121L1PQ3SYA9 428 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 ARSIQ5FYB1 569 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 ATXN7L2Q5T6C5 722 aaPredicted RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 C9orf64Q5T6V5 341 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 FAM46CQ5VWP2 391 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 AFMIDQ63HM1 303 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 DARS2Q6PI48 645 aaKnown RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 ZC3H14Q6PJT7 736 aaKnown RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 BBS12Q6ZW61 710 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 B4GALNT4Q76KP1 1039 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 CEP68Q76N32 757 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 FAM124AQ86V42 546 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms