RNA–Protein interactions for RNA: ENST00000541668.5

PARPBP-211, Transcript of PARP1 binding protein, humanhuman

TSL 2

Gene PARPBP, Length 1,061 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBP-211ENST00000541668 PDFQ9HBH1 243 aa17.25■□□□□ 0.35
PARPBP-211ENST00000541668 PRMT8Q9NR22 394 aaPredicted RBP17.25■□□□□ 0.35
PARPBP-211ENST00000541668 SEPT3Q9UH03 358 aa17.25■□□□□ 0.35
PARPBP-211ENST00000541668 CACNA1IQ9P0X4 2223 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 TTC34A8MYJ7 566 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 MATN3O15232 486 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 GALR2O43603 387 aaPredicted RBP17.24■□□□□ 0.35
PARPBP-211ENST00000541668 NEBLO76041 1014 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 GSRP00390 522 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 MT-CO1P00395 513 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 PRKCHP24723 683 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 MAPK8P45983 427 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 RHOAP61586 193 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 RAD51Q06609 339 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 ZNF211Q13398 564 aaPredicted RBP17.24■□□□□ 0.35
PARPBP-211ENST00000541668 BYSLQ13895 437 aaKnown RBP17.24■□□□□ 0.35
PARPBP-211ENST00000541668 HNRNPDQ14103 355 aaKnown RBP17.24■□□□□ 0.35
PARPBP-211ENST00000541668 ZNF528Q3MIS6 628 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 MARC1Q5VT66 337 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 PKN3Q6P5Z2 889 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 OR2T3Q8NH03 318 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 NAP1L3Q99457 506 aaPredicted RBP17.24■□□□□ 0.35
PARPBP-211ENST00000541668 IRF2BPLQ9H1B7 796 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 KCNH6Q9H252 994 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 SCML1Q9UN30 329 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 MFHAS1Q9Y4C4 1052 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 KMT2EQ8IZD2 1858 aa17.24■□□□□ 0.35
PARPBP-211ENST00000541668 ZNF318Q5VUA4 2279 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 A0A1W2PQF6 199 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 TCRBV21S2A2A0A5A6 115 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 WASH3PC4AMC7 463 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 J3KR12 359 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 CES2O00748 559 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 TMCC1O94876 653 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 IGSF6O95976 241 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 TUBB4AP04350 444 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 HLA-EP13747 358 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 TCP1P17987 556 aaKnown RBP17.23■□□□□ 0.35
PARPBP-211ENST00000541668 SATB1Q01826 763 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 PPIDQ08752 370 aaKnown RBP17.23■□□□□ 0.35
PARPBP-211ENST00000541668 ZNF235Q14590 738 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 LBRQ14739 615 aaKnown RBP17.23■□□□□ 0.35
PARPBP-211ENST00000541668 GRM3Q14832 879 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 CARD16Q5EG05 197 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 DCAF12L1Q5VU92 463 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 FAM46CQ5VWP2 391 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 ZNF776Q68DI1 518 aaPredicted RBP17.23■□□□□ 0.35
PARPBP-211ENST00000541668 CCDC13Q8IYE1 715 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 OR2AP1Q8NGE2 309 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 PTPRN2Q92932 1015 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 LRIG1Q96JA1 1093 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 GDAP1L1Q96MZ0 367 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 OLFM3Q96PB7 478 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 CINPQ9BW66 212 aaPredicted RBP17.23■□□□□ 0.35
PARPBP-211ENST00000541668 ZDHHC4Q9NPG8 344 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 PRSS16Q9NQE7 514 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 BCCIPQ9P287 314 aaKnown RBP eCLIP17.23■□□□□ 0.35
PARPBP-211ENST00000541668 EBF1Q9UH73 591 aa17.23■□□□□ 0.35
PARPBP-211ENST00000541668 NYNRINQ9P2P1 1898 aaKnown RBP17.22■□□□□ 0.35
PARPBP-211ENST00000541668 CTAGE9A4FU28 777 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 MCF2LO15068 1137 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 SMAD6O43541 496 aaKnown RBP17.22■□□□□ 0.35
PARPBP-211ENST00000541668 SIN3BO75182 1162 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 PRNPP04156 253 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 C7P10643 843 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 PRLRP16471 622 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 CES1P23141 567 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 CSNK1DP48730 415 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 CSTF1Q05048 431 aaKnown RBP17.22■□□□□ 0.35
PARPBP-211ENST00000541668 NSUN2Q08J23 767 aaKnown RBP eCLIP17.22■□□□□ 0.35
PARPBP-211ENST00000541668 CCDC15Q0P6D6 951 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 SLC10A2Q12908 348 aaPredicted RBP17.22■□□□□ 0.35
PARPBP-211ENST00000541668 NOMO1Q15155 1222 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 RALGPS1Q5JS13 557 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 C9orf64Q5T6V5 341 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 TMEM92Q6UXU6 159 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 PGBD3Q8N328 593 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 TFB1MQ8WVM0 346 aaKnown RBP17.22■□□□□ 0.35
PARPBP-211ENST00000541668 PRCCQ92733 491 aaPredicted RBP17.22■□□□□ 0.35
PARPBP-211ENST00000541668 PSKH2Q96QS6 385 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 NAPGQ99747 312 aaPredicted RBP17.22■□□□□ 0.35
PARPBP-211ENST00000541668 RSPH9Q9H1X1 276 aaPredicted RBP17.22■□□□□ 0.35
PARPBP-211ENST00000541668 HOMER3Q9NSC5 361 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 FCF1Q9Y324 198 aaKnown RBP17.22■□□□□ 0.35
PARPBP-211ENST00000541668 TRIOO75962 3097 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 SHROOM3Q8TF72 1996 aa17.22■□□□□ 0.35
PARPBP-211ENST00000541668 C1QTNF3-AMACRE9PGA6 284 aa17.21■□□□□ 0.35
PARPBP-211ENST00000541668 K7ERQ8 282 aa17.21■□□□□ 0.35
PARPBP-211ENST00000541668 ENC1O14682 589 aa17.21■□□□□ 0.35
PARPBP-211ENST00000541668 CEP104O60308 925 aa17.21■□□□□ 0.35
PARPBP-211ENST00000541668 POP4O95707 220 aaKnown RBP17.21■□□□□ 0.35
PARPBP-211ENST00000541668 CD160O95971 181 aa17.21■□□□□ 0.35
PARPBP-211ENST00000541668 ADH1BP00325 375 aa17.21■□□□□ 0.35
PARPBP-211ENST00000541668 ACADMP11310 421 aa17.21■□□□□ 0.35
PARPBP-211ENST00000541668 CCNB1P14635 433 aa17.21■□□□□ 0.35
PARPBP-211ENST00000541668 MMP13P45452 471 aa17.21■□□□□ 0.35
PARPBP-211ENST00000541668 NUMBP49757 651 aa17.21■□□□□ 0.35
PARPBP-211ENST00000541668 AP1B1Q10567 949 aa17.21■□□□□ 0.35
PARPBP-211ENST00000541668 KLF1Q13351 362 aaPredicted RBP17.21■□□□□ 0.35
PARPBP-211ENST00000541668 TTC31Q49AM3 519 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms