RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	OVGP1	Q12889	678 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	TEAD4	Q15561	434 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	SLC18A3	Q16572	532 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	TSR1	Q2NL82	804 aa	Known RBP	12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828		Q6ZVU0	165 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	TRIM69	Q86WT6	500 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	HDDC3	Q8N4P3	179 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	LZTR1	Q8N653	840 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	ARFGAP1	Q8N6T3	406 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	PIP4K2C	Q8TBX8	421 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	GANC	Q8TET4	914 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	TEKT4	Q8WW24	435 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	SKA1	Q96BD8	255 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	BIRC7	Q96CA5	298 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	ERLEC1	Q96DZ1	483 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	PPP1R16A	Q96I34	528 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	HDAC8	Q9BY41	377 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	C6orf106	Q9H6K1	298 aa	Predicted RBP	12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	PREB	Q9HCU5	417 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	ZNHIT6	Q9NWK9	470 aa	Known RBP	12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	UVRAG	Q9P2Y5	699 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	IP6K2	Q9UHH9	426 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	AP4E1	Q9UPM8	1137 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	DMTF1	Q9Y222	760 aa		12.56	□□□□□ -0.4
CLTCL1-205	ENST00000538828	FAM170A	A1A519	330 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	SMAD6	O43541	496 aa	Known RBP	12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	OPHN1	O60890	802 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	RNGTT	O60942	597 aa	Known RBP	12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	RNASEH2A	O75792	299 aa	Known RBP	12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	GSR	P00390	522 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	IGHV4-34	P06331	123 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	VAV1	P15498	845 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	MIP	P30301	263 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	PSMD8	P48556	350 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	TPI1	P60174	286 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	SNRPD1	P62314	119 aa	Known RBP	12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	DPYSL2	Q16555	572 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	ASTE1	Q2TB18	679 aa	Predicted RBP	12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	CARD16	Q5EG05	197 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	TMCO4	Q5TGY1	634 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	AGBL4	Q5VU57	503 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	NCEH1	Q6PIU2	408 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	FAM124A	Q86V42	546 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	IQCH	Q86VS3	1027 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	CNGA4	Q8IV77	575 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	DEFB119	Q8N690	84 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	FAM174A	Q8TBP5	190 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	CPLX3	Q8WVH0	158 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	HEPH	Q9BQS7	1158 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	ORAI3	Q9BRQ5	295 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	SPON2	Q9BUD6	331 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	SNRNP25	Q9BV90	132 aa	Known RBP	12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	OSBPL1A	Q9BXW6	950 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	NOL6	Q9H6R4	1146 aa	Known RBP	12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	NDFIP2	Q9NV92	336 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	RCOR3	Q9P2K3	495 aa	Predicted RBP	12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	SERGEF	Q9UGK8	458 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	IL36A	Q9UHA7	158 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	EIF2B4	Q9UI10	523 aa	Known RBP	12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	DNAI1	Q9UI46	699 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	SARDH	Q9UL12	918 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	MFHAS1	Q9Y4C4	1052 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828	PCDHGB2	Q9Y5G2	931 aa		12.55	□□□□□ -0.4
CLTCL1-205	ENST00000538828		K7ERQ8	282 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	MYO1F	O00160	1098 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	VILL	O15195	856 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	ATMIN	O43313	823 aa	Predicted RBP	12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	AP1G1	O43747	822 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	MAGEC1	O60732	1142 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	POP4	O95707	220 aa	Known RBP	12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	CER1	O95813	267 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	H2AFZ	P0C0S5	128 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	ITGB7	P26010	798 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	ACVRL1	P37023	503 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	GRIK2	Q13002	908 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	SERINC3	Q13530	473 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	GRM3	Q14832	879 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	CCDC122	Q5T0U0	273 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	AFMID	Q63HM1	303 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	DBX2	Q6ZNG2	339 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	DPY19L3	Q6ZPD9	716 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	H2AFV	Q71UI9	128 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	PIP4P1	Q86T03	277 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	CACUL1	Q86Y37	369 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	PYROXD2	Q8N2H3	581 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	ZCCHC9	Q8N567	271 aa	Known RBP	12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	MINDY1	Q8N5J2	469 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	OR2AP1	Q8NGE2	309 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	OR14C36	Q8NHC7	312 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	HCAR2	Q8TDS4	363 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	RAB7B	Q96AH8	199 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	THAP2	Q9H0W7	228 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	LRRC19	Q9H756	370 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	ZWILCH	Q9H900	591 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	TM9SF3	Q9HD45	589 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	DYRK4	Q9NR20	520 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	WASF2	Q9Y6W5	498 aa		12.54	□□□□□ -0.4
CLTCL1-205	ENST00000538828	ATXN2	Q99700	1313 aa	Known RBP	12.54	□□□□□ -0.4

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