RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-206	ENST00000536429	RFX8	Q6ZV50	586 aa		13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	DGLUCY	Q7Z3D6	616 aa		13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	OR6K2	Q8NGY2	324 aa		13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	OR14C36	Q8NHC7	312 aa		13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	GRIN3A	Q8TCU5	1115 aa		13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	FAM131C	Q96AQ9	280 aa		13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	VOPP1	Q96AW1	172 aa		13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	ARRDC3	Q96B67	414 aa		13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	CELF6	Q96J87	481 aa	Known RBP	13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	RTKN	Q9BST9	563 aa		13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	NUSAP1	Q9BXS6	441 aa	Known RBP	13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	TM6SF2	Q9BZW4	377 aa		13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	TRIM5	Q9C035	493 aa		13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	RETREG1	Q9H6L5	497 aa		13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	SPTLC3	Q9NUV7	552 aa		13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	SLC6A14	Q9UN76	642 aa		13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	MFHAS1	Q9Y4C4	1052 aa		13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	DOCK4	Q8N1I0	1966 aa		13.43	□□□□□ -0.26
PRKDC-206	ENST00000536429	SSU72P8	A0A1W2PR75	194 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	EEF2K	O00418	725 aa	Known RBP	13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	ALOX15B	O15296	676 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	KDELR3	O43731	214 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	PCK1	P35558	622 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	DPP6	P42658	865 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	DNA2	P51530	1060 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	PPP2CB	P62714	309 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	PPP2CA	P67775	309 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	SLC25A11	Q02978	314 aa	Known RBP	13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	SLC20A2	Q08357	652 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	ARSI	Q5FYB1	569 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	AGBL4	Q5VU57	503 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	KIAA0895L	Q68EN5	471 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	DSG4	Q86SJ6	1040 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	ZNF354C	Q86Y25	554 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	TP53INP2	Q8IXH6	220 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	UMODL1-AS1	Q8N2C9	162 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	NPW	Q8N729	165 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	NIPA2	Q8N8Q9	360 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	CEP76	Q8TAP6	659 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	HSPH1	Q92598	858 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	GTPBP2	Q9BX10	602 aa	Known RBP	13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	CEP44	Q9C0F1	390 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	PCED1A	Q9H1Q7	454 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	LRRC19	Q9H756	370 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	CATSPERB	Q9H7T0	1116 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	ZWILCH	Q9H900	591 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	TMEM9B	Q9NQ34	198 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	CWC15	Q9P013	229 aa	Known RBP	13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	FZD4	Q9ULV1	537 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	WASF2	Q9Y6W5	498 aa		13.42	□□□□□ -0.26
PRKDC-206	ENST00000536429	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	C1QTNF3-AMACR	E9PGA6	284 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	KPNA3	O00505	521 aa	Predicted RBP	13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	BCAT2	O15382	392 aa	Predicted RBP	13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	FGF10	O15520	208 aa	Predicted RBP	13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	BUB1	O43683	1085 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	LEFTY1	O75610	366 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	RARA	P10276	462 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	ERCC2	P18074	760 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	SDHB	P21912	280 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	ETFB	P38117	255 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	ZNF75D	P51815	510 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	CCNH	P51946	323 aa	Predicted RBP	13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	TAS2R38	P59533	333 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	GRIK2	Q13002	908 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	SERINC3	Q13530	473 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	DPYS	Q14117	519 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	PIGH	Q14442	188 aa	Predicted RBP	13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	UAP1L1	Q3KQV9	507 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	CARD16	Q5EG05	197 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	PIP5KL1	Q5T9C9	394 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	FAM46C	Q5VWP2	391 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	ARHGAP12	Q8IWW6	846 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	PCDH20	Q8N6Y1	951 aa	Known RBP	13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	TC2N	Q8N9U0	490 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	OR2T34	Q8NGX1	318 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	SLC39A8	Q9C0K1	460 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	DEF6	Q9H4E7	631 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	TM9SF3	Q9HD45	589 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	OSGEP	Q9NPF4	335 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	ETNK2	Q9NVF9	386 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	CTTNBP2NL	Q9P2B4	639 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	IL36A	Q9UHA7	158 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	IP6K2	Q9UHH9	426 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	KNL1	Q8NG31	2342 aa		13.41	□□□□□ -0.26
PRKDC-206	ENST00000536429	PI4KA	P42356	2102 aa		13.4	□□□□□ -0.26
PRKDC-206	ENST00000536429		A0A1B0GTW7	788 aa		13.4	□□□□□ -0.26
PRKDC-206	ENST00000536429	MED19	A0JLT2	244 aa	Predicted RBP	13.4	□□□□□ -0.26
PRKDC-206	ENST00000536429	LRRC72	A6NJI9	287 aa		13.4	□□□□□ -0.26
PRKDC-206	ENST00000536429		J3KR12	359 aa		13.4	□□□□□ -0.26
PRKDC-206	ENST00000536429	ARHGAP33	O14559	1287 aa		13.4	□□□□□ -0.26
PRKDC-206	ENST00000536429	WNT9A	O14904	365 aa		13.4	□□□□□ -0.26
PRKDC-206	ENST00000536429	PLRG1	O43660	514 aa	Known RBP	13.4	□□□□□ -0.26
PRKDC-206	ENST00000536429	AKR1B10	O60218	316 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms