RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 SPON2Q9BUD6 331 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 RALYQ9UKM9 306 aaKnown RBP13.38□□□□□ -0.27
CHFR-210ENST00000535527 INVSQ9Y283 1065 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 MYLKQ15746 1914 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 CEP295Q9C0D2 2601 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 SDK1Q7Z5N4 2213 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 ZZEF1O43149 2961 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 MUSKO15146 869 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 PSTPIP1O43586 416 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 ASLP04424 464 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 SRPRAP08240 638 aaKnown RBP13.37□□□□□ -0.27
CHFR-210ENST00000535527 C7P10643 843 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 KRT10P13645 584 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 PECAM1P16284 738 aaPredicted RBP13.37□□□□□ -0.27
CHFR-210ENST00000535527 HTR7P34969 479 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 CTNNA1P35221 906 aaKnown RBP13.37□□□□□ -0.27
CHFR-210ENST00000535527 CDKN2BP42772 138 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 SLC1A1P43005 524 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 SERPINH1P50454 418 aaKnown RBP13.37□□□□□ -0.27
CHFR-210ENST00000535527 PAPOLAP51003 745 aaKnown RBP13.37□□□□□ -0.27
CHFR-210ENST00000535527 KRT81Q14533 505 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 POLD3Q15054 466 aaPredicted RBP13.37□□□□□ -0.27
CHFR-210ENST00000535527 HADHQ16836 314 aaKnown RBP13.37□□□□□ -0.27
CHFR-210ENST00000535527 HSF5Q4G112 596 aaPredicted RBP13.37□□□□□ -0.27
CHFR-210ENST00000535527 EOGTQ5NDL2 527 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 LRRC38Q5VT99 294 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 C22orf39Q6P5X5 142 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 ZNF783Q6ZMS7 281 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 B4GALNT4Q76KP1 1039 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 LONP2Q86WA8 852 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 RHOT1Q8IXI2 618 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 TSTD1Q8NFU3 115 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 HMGB4Q8WW32 186 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 RLN3Q8WXF3 142 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 EXOC4Q96A65 974 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 RNF157Q96PX1 679 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 FAM129BQ96TA1 746 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 NCAPGQ9BPX3 1015 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 CALN1Q9BXU9 219 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 MAGEH1Q9H213 219 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 TNKS2Q9H2K2 1166 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 CATSPERBQ9H7T0 1116 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 LZTFL1Q9NQ48 299 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 LHX3Q9UBR4 397 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 SERGEFQ9UGK8 458 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 SARDHQ9UL12 918 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 GUCA1BQ9UMX6 200 aa13.37□□□□□ -0.27
CHFR-210ENST00000535527 hCG_1818297A0A087WSY0 165 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 PLK4O00444 970 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 FANCGO15287 622 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 KDELR3O43731 214 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 IPO7O95373 1038 aaKnown RBP13.36□□□□□ -0.27
CHFR-210ENST00000535527 ATP5BP06576 529 aaKnown RBP13.36□□□□□ -0.27
CHFR-210ENST00000535527 KRT7P08729 469 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 DESP17661 470 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 KCNA4P22459 653 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 CTNNA2P26232 953 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 HOXA6P31267 233 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 GKP32189 559 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 ARL4AP40617 200 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
CHFR-210ENST00000535527 KIF5AQ12840 1032 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 IHHQ14623 411 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 PAFAH1B3Q15102 231 aaKnown RBP13.36□□□□□ -0.27
CHFR-210ENST00000535527 DLG2Q15700 870 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 PREPLQ4J6C6 727 aaPredicted RBP13.36□□□□□ -0.27
CHFR-210ENST00000535527 AASDHQ4L235 1098 aaPredicted RBP13.36□□□□□ -0.27
CHFR-210ENST00000535527 SLC9A4Q6AI14 798 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 SPOCD1Q6ZMY3 1216 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 ZNF662Q6ZS27 426 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 KATNAL2Q8IYT4 538 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 STK40Q8N2I9 435 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 ZNF557Q8N988 423 aaPredicted RBP13.36□□□□□ -0.27
CHFR-210ENST00000535527 OR2A12Q8NGT7 310 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 UCMAQ8WVF2 138 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 LOXL4Q96JB6 756 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 RCOR3Q9P2K3 495 aaPredicted RBP13.36□□□□□ -0.27
CHFR-210ENST00000535527 MBD1Q9UIS9 605 aaPredicted RBP13.36□□□□□ -0.27
CHFR-210ENST00000535527 SLC8A2Q9UPR5 921 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 ADAMTS9Q9P2N4 1935 aa13.36□□□□□ -0.27
CHFR-210ENST00000535527 SCN8AQ9UQD0 1980 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 DFFAO00273 331 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 TIMM44O43615 452 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 PRAMEF11O60813 436 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 ATG13O75143 517 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 TMCC1O94876 653 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 APBB3O95704 486 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 CCDC175P0C221 793 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 DGKEP52429 567 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 NDST2P52849 883 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 OXCT1P55809 520 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 YBEYP58557 167 aaPredicted RBP13.35□□□□□ -0.27
CHFR-210ENST00000535527 RPS14P62263 151 aaKnown RBP13.35□□□□□ -0.27
CHFR-210ENST00000535527 ZNF211Q13398 564 aaPredicted RBP13.35□□□□□ -0.27
CHFR-210ENST00000535527 PDK2Q15119 407 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 CYTH1Q15438 398 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 MAP7D1Q3KQU3 841 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 PARP15Q460N3 678 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 ATXN7L2Q5T6C5 722 aaPredicted RBP13.35□□□□□ -0.27
CHFR-210ENST00000535527 TMCO3Q6UWJ1 677 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms