RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 BIRC7Q96CA5 298 aa14.09□□□□□ -0.15
TMEM258-203ENST00000535297 PEBP4Q96S96 227 aa14.09□□□□□ -0.15
TMEM258-203ENST00000535297 SNRNP25Q9BV90 132 aaKnown RBP14.09□□□□□ -0.15
TMEM258-203ENST00000535297 KDM4CQ9H3R0 1056 aa14.09□□□□□ -0.15
TMEM258-203ENST00000535297 DHX35Q9H5Z1 703 aaKnown RBP14.09□□□□□ -0.15
TMEM258-203ENST00000535297 FSCN3Q9NQT6 498 aa14.09□□□□□ -0.15
TMEM258-203ENST00000535297 GPATCH2LQ9NWQ4 482 aa14.09□□□□□ -0.15
TMEM258-203ENST00000535297 HPCAL4Q9UM19 191 aa14.09□□□□□ -0.15
TMEM258-203ENST00000535297 NENFQ9UMX5 172 aa14.09□□□□□ -0.15
TMEM258-203ENST00000535297 NCOR2Q9Y618 2525 aa14.08□□□□□ -0.15
TMEM258-203ENST00000535297 FAM47DPA6NHR8 397 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 EEF2KO00418 725 aaKnown RBP14.08□□□□□ -0.16
TMEM258-203ENST00000535297 PLRG1O43660 514 aaKnown RBP14.08□□□□□ -0.16
TMEM258-203ENST00000535297 LRCH4O75427 683 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 CYP1A2P05177 515 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 CTSLP07711 333 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 CCR5P51681 352 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 AFF3P51826 1226 aaKnown RBP14.08□□□□□ -0.16
TMEM258-203ENST00000535297 METAP1P53582 386 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 GRIK2Q13002 908 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 PARP15Q460N3 678 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 PPM1JQ5JR12 505 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 CCDC122Q5T0U0 273 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 AGBL4Q5VU57 503 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 CYP4V2Q6ZWL3 525 aaPredicted RBP14.08□□□□□ -0.16
TMEM258-203ENST00000535297 PLPP6Q8IY26 295 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 UMODL1-AS1Q8N2C9 162 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 MINDY1Q8N5J2 469 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 OR8K1Q8NGG5 319 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 OR14C36Q8NHC7 312 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 GTPBP2Q9BX10 602 aaKnown RBP14.08□□□□□ -0.16
TMEM258-203ENST00000535297 THAP2Q9H0W7 228 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 TNKS2Q9H2K2 1166 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 NOL6Q9H6R4 1146 aaKnown RBP14.08□□□□□ -0.16
TMEM258-203ENST00000535297 IL36AQ9UHA7 158 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 PCSK1NQ9UHG2 260 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 FCF1Q9Y324 198 aaKnown RBP14.08□□□□□ -0.16
TMEM258-203ENST00000535297 PLXNA2O75051 1894 aa14.08□□□□□ -0.16
TMEM258-203ENST00000535297 LAMA1P25391 3075 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 A0A1W2PPC4 97 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 SSU72P8A0A1W2PR75 194 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 MED19A0JLT2 244 aaPredicted RBP14.07□□□□□ -0.16
TMEM258-203ENST00000535297 RASA4BC9J798 803 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 RASA4O43374 803 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 KDELR3O43731 214 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 OPHN1O60890 802 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 MFAP3LO75121 409 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 ZNF821O75541 412 aaPredicted RBP14.07□□□□□ -0.16
TMEM258-203ENST00000535297 CD160O95971 181 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 EIF4A3P38919 411 aaKnown RBP14.07□□□□□ -0.16
TMEM258-203ENST00000535297 GRIA4P48058 902 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 CCDC15Q0P6D6 951 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 CNTN1Q12860 1018 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 MAPK8IP2Q13387 824 aaPredicted RBP14.07□□□□□ -0.16
TMEM258-203ENST00000535297 PIGHQ14442 188 aaPredicted RBP14.07□□□□□ -0.16
TMEM258-203ENST00000535297 TEAD4Q15561 434 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 CA9Q16790 459 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 UAP1L1Q3KQV9 507 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 CARD16Q5EG05 197 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 SARM1Q6SZW1 724 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.07□□□□□ -0.16
TMEM258-203ENST00000535297 DPY19L3Q6ZPD9 716 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 NIPA2Q8N8Q9 360 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 CHST14Q8NCH0 376 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 CASKIN2Q8WXE0 1202 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 PPP1R16AQ96I34 528 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 KCTD15Q96SI1 283 aaPredicted RBP14.07□□□□□ -0.16
TMEM258-203ENST00000535297 ORAI3Q9BRQ5 295 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 NUP85Q9BW27 656 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 TM9SF3Q9HD45 589 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 DYRK4Q9NR20 520 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 DNAAF2Q9NVR5 837 aaKnown RBP14.07□□□□□ -0.16
TMEM258-203ENST00000535297 ZNHIT6Q9NWK9 470 aaKnown RBP14.07□□□□□ -0.16
TMEM258-203ENST00000535297 IP6K2Q9UHH9 426 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 WASF2Q9Y6W5 498 aa14.07□□□□□ -0.16
TMEM258-203ENST00000535297 UPK3BL1B0FP48 263 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 UPK3BL2E5RIL1 263 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 PLK4O00444 970 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 KPNA3O00505 521 aaPredicted RBP14.06□□□□□ -0.16
TMEM258-203ENST00000535297 CER1O95813 267 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 GSRP00390 522 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 CSRP1P21291 193 aaKnown RBP14.06□□□□□ -0.16
TMEM258-203ENST00000535297 NUDT1P36639 197 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 CCNHP51946 323 aaPredicted RBP14.06□□□□□ -0.16
TMEM258-203ENST00000535297 NDST2P52849 883 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 SERINC3Q13530 473 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 SLC18A3Q16572 532 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 TSR1Q2NL82 804 aaKnown RBP14.06□□□□□ -0.16
TMEM258-203ENST00000535297 POM121L1PQ3SYA9 428 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 PIP5KL1Q5T9C9 394 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 IL27RAQ6UWB1 636 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 RFX8Q6ZV50 586 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 TRIM69Q86WT6 500 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 ZNF354CQ86Y25 554 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 GRIN3AQ8TCU5 1115 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 ARRDC3Q96B67 414 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 ARHGEF26Q96DR7 871 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 HMCESQ96FZ2 354 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 HEPHQ9BQS7 1158 aa14.06□□□□□ -0.16
TMEM258-203ENST00000535297 HDAC8Q9BY41 377 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms