RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 PAQR9Q6ZVX9 377 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 TADA2BQ86TJ2 420 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 CCDC25Q86WR0 208 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 ADAM32Q8TC27 787 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 ERLEC1Q96DZ1 483 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 UBL7Q96S82 380 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-207ENST00000533242 GPR174Q9BXC1 333 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 PCED1AQ9H1Q7 454 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 FBXO44Q9H4M3 255 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 LRRC19Q9H756 370 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 TLR8Q9NR97 1041 aaKnown RBP8.47□□□□□ -1.05
NEDD8-207ENST00000533242 FBXO10Q9UK96 956 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 LAMA1P25391 3075 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 TLR5O60602 858 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 ATXN1LP0C7T5 689 aaKnown RBP8.47□□□□□ -1.05
NEDD8-207ENST00000533242 RALAP11233 206 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 CREB1P16220 341 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 MYL6P60660 151 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 RPL7AP62424 266 aaKnown RBP8.47□□□□□ -1.05
NEDD8-207ENST00000533242 CYP4F3Q08477 520 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 KLF1Q13351 362 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-207ENST00000533242 MAMLD1Q13495 774 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 TRPC3Q13507 836 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 ENPP2Q13822 863 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 SUZ12Q15022 739 aaKnown RBP8.47□□□□□ -1.05
NEDD8-207ENST00000533242 HLA-BQ31612 363 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 FUT11Q495W5 492 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 SGO2Q562F6 1265 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 DENND2CQ68D51 928 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 MMS22LQ6ZRQ5 1243 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 TPGS1Q6ZTW0 290 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 RHBDD1Q8TEB9 315 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 TNIP3Q96KP6 325 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 MIR1-1HGQ9H1L0 117 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 THAP10Q9P2Z0 257 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-207ENST00000533242 RASAL2Q9UJF2 1139 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 FNDC3AQ9Y2H6 1198 aaKnown RBP8.47□□□□□ -1.05
NEDD8-207ENST00000533242 SLC27A6Q9Y2P4 619 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 PCDHB4Q9Y5E5 795 aa8.47□□□□□ -1.05
NEDD8-207ENST00000533242 COL5A1P20908 1838 aaPredicted RBP8.46□□□□□ -1.05
NEDD8-207ENST00000533242 SPEGQ15772 3267 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 GMNCA6NCL1 334 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 TRABD2BA6NFA1 517 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 AP1G2O75843 785 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 ECEL1O95672 775 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 CD58P19256 250 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 GNA15P30679 374 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 GJC1P36383 396 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 ATP5C1P36542 298 aaKnown RBP8.46□□□□□ -1.05
NEDD8-207ENST00000533242 NSFP46459 744 aaKnown RBP8.46□□□□□ -1.05
NEDD8-207ENST00000533242 FNTAP49354 379 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 CAMK2BQ13554 666 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 ZNF394Q53GI3 561 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 TXNRD3NBQ6F5E7 133 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 C6orf89Q6UWU4 347 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 ENOSF1Q7L5Y1 443 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 GLIS1Q8NBF1 620 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 RBBP8NLQ8NC74 664 aaPredicted RBP8.46□□□□□ -1.05
NEDD8-207ENST00000533242 ZMIZ2Q8NF64 920 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 XYLT2Q9H1B5 865 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 CDC42EP4Q9H3Q1 356 aaKnown RBP8.46□□□□□ -1.05
NEDD8-207ENST00000533242 VRTNQ9H8Y1 702 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 CYLDQ9NQC7 956 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 CTNNAL1Q9UBT7 734 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 NXF1Q9UBU9 619 aaKnown RBP8.46□□□□□ -1.05
NEDD8-207ENST00000533242 NEU2Q9Y3R4 380 aa8.46□□□□□ -1.05
NEDD8-207ENST00000533242 MUC22E2RYF6 1773 aaPredicted RBP8.46□□□□□ -1.05
NEDD8-207ENST00000533242 ANKRD11Q6UB99 2663 aaPredicted RBP8.46□□□□□ -1.06
NEDD8-207ENST00000533242 WASH3PC4AMC7 463 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 TK2O00142 265 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 TNFSF14O43557 240 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 PROSCO94903 275 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 ACSL3O95573 720 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 PAEPP09466 180 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 CHN1P15882 459 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 PGFP49763 221 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 TPMTP51580 245 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 OGDHQ02218 1023 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 C19orf57Q0VDD7 668 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 IFT88Q13099 833 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 NCOA4Q13772 614 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 PPP1R7Q15435 360 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 LONRF1Q17RB8 773 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 FBXW10Q5XX13 1052 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 KLHDC10Q6PID8 442 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 Q6ZNB5 142 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 FUKQ8N0W3 1084 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 PDCD7Q8N8D1 485 aaKnown RBP8.46□□□□□ -1.06
NEDD8-207ENST00000533242 C1orf216Q8TAB5 229 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 UCMAQ8WVF2 138 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 PRCCQ92733 491 aaPredicted RBP8.46□□□□□ -1.06
NEDD8-207ENST00000533242 SMOQ99835 787 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 DCLK3Q9C098 648 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 SMYD3Q9H7B4 428 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 CSNK1G1Q9HCP0 422 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 KRT82Q9NSB4 513 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 SCML2Q9UQR0 700 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 ZNF510Q9Y2H8 683 aa8.46□□□□□ -1.06
NEDD8-207ENST00000533242 ITPR1Q14643 2758 aa8.45□□□□□ -1.06
NEDD8-207ENST00000533242 A6NNZ2 444 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms