RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 BBS9Q3SYG4 887 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 AGBL2Q5U5Z8 902 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 WFDC5Q8TCV5 224 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 TMEM109Q9BVC6 243 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 BBS2Q9BXC9 721 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 TBC1D30Q9Y2I9 924 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 SHROOM3Q8TF72 1996 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 RASA4BC9J798 803 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 NCAM2O15394 837 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 RASA4O43374 803 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 LUC7L3O95232 432 aaKnown RBP18.85■□□□□ 0.61
SMPD1-208ENST00000533123 ACVRL1P37023 503 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 IFNAR2P48551 515 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 SMAD4Q13485 552 aaKnown RBP18.85■□□□□ 0.61
SMPD1-208ENST00000533123 GRM2Q14416 872 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 EML3Q32P44 896 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 ANKRD20A2Q5SQ80 823 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 MPP7Q5T2T1 576 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 C6orf118Q5T5N4 469 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 ANKRD20A1Q5TYW2 823 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 ANKRD20A3Q5VUR7 823 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 CXorf57Q6NSI4 855 aaKnown RBP18.85■□□□□ 0.61
SMPD1-208ENST00000533123 ARHGEF18Q6ZSZ5 1173 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 OTOP3Q7RTS5 596 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 MFN1Q8IWA4 741 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 EBF3Q9H4W6 596 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 RETREG1Q9H6L5 497 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 CTNNAL1Q9UBT7 734 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 A0A0A0MRY4 1105 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 KCNK1O00180 336 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 RHOCP08134 193 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 IFI35P80217 286 aaPredicted RBP18.85■□□□□ 0.61
SMPD1-208ENST00000533123 CDH18Q13634 790 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 SRLQ86TD4 932 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 SETD3Q86TU7 594 aaPredicted RBP18.85■□□□□ 0.61
SMPD1-208ENST00000533123 ZNF354CQ86Y25 554 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 MFSD6LQ8IWD5 586 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 HDAC11Q96DB2 347 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 PGM2Q96G03 612 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 SPATA13Q96N96 652 aa18.85■□□□□ 0.61
SMPD1-208ENST00000533123 E7ESA3 106 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 RGS16O15492 202 aaPredicted RBP18.84■□□□□ 0.61
SMPD1-208ENST00000533123 ARSAP15289 507 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 GNA12Q03113 381 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 PPIDQ08752 370 aaKnown RBP18.84■□□□□ 0.61
SMPD1-208ENST00000533123 WASHC5Q12768 1159 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 DHCR24Q15392 516 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 LEKR1Q6ZMV7 388 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 PDIK1LQ8N165 341 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 AGGF1Q8N302 714 aaeCLIP18.84■□□□□ 0.61
SMPD1-208ENST00000533123 ATPAF2Q8N5M1 289 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 FBXO36Q8NEA4 188 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 OR7D4Q8NG98 312 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 E2F7Q96AV8 911 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 ELSPBP1Q96BH3 223 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 TLCD1Q96CP7 247 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 SERPINB12Q96P63 405 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 FAM83CQ9BQN1 747 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 VPS37BQ9H9H4 285 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 THG1LQ9NWX6 298 aaKnown RBP18.84■□□□□ 0.61
SMPD1-208ENST00000533123 NYNRINQ9P2P1 1898 aaKnown RBP18.84■□□□□ 0.61
SMPD1-208ENST00000533123 SMAPO00193 183 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 MAFKO60675 156 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 TYRP14679 529 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 YBEYP58557 167 aaPredicted RBP18.84■□□□□ 0.61
SMPD1-208ENST00000533123 GPX6P59796 221 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 TNK2Q07912 1038 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 FCHO2Q0JRZ9 810 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 PARP15Q460N3 678 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 TTC19Q6DKK2 380 aaPredicted RBP18.84■□□□□ 0.61
SMPD1-208ENST00000533123 IGDCC3Q8IVU1 814 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 KIAA1958Q8N8K9 716 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 ARHGEF2Q92974 986 aaKnown RBP18.84■□□□□ 0.61
SMPD1-208ENST00000533123 TTC25Q96NG3 672 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 RASSF4Q9H2L5 321 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 EPS15L1Q9UBC2 864 aa18.84■□□□□ 0.61
SMPD1-208ENST00000533123 MYO18AQ92614 2054 aaKnown RBP18.83■□□□□ 0.61
SMPD1-208ENST00000533123 OTOL1A6NHN0 477 aaPredicted RBP18.83■□□□□ 0.6
SMPD1-208ENST00000533123 ARHGAP42A6NI28 874 aa18.83■□□□□ 0.6
SMPD1-208ENST00000533123 PENKP01210 267 aaPredicted RBP18.83■□□□□ 0.6
SMPD1-208ENST00000533123 CYP17A1P05093 508 aa18.83■□□□□ 0.6
SMPD1-208ENST00000533123 ABHD2P08910 425 aa18.83■□□□□ 0.6
SMPD1-208ENST00000533123 PSMC3P17980 439 aa18.83■□□□□ 0.6
SMPD1-208ENST00000533123 MAGEA6P43360 314 aa18.83■□□□□ 0.6
SMPD1-208ENST00000533123 RNF219Q5W0B1 726 aaPredicted RBP18.83■□□□□ 0.6
SMPD1-208ENST00000533123 KDM7AQ6ZMT4 941 aa18.83■□□□□ 0.6
SMPD1-208ENST00000533123 ZNF567Q8N184 647 aa18.83■□□□□ 0.6
SMPD1-208ENST00000533123 PYROXD1Q8WU10 500 aa18.83■□□□□ 0.6
SMPD1-208ENST00000533123 SPON2Q9BUD6 331 aa18.83■□□□□ 0.6
SMPD1-208ENST00000533123 MUC3BQ9H195 1237 aa18.83■□□□□ 0.6
SMPD1-208ENST00000533123 IPO11Q9UI26 975 aaKnown RBP18.83■□□□□ 0.6
SMPD1-208ENST00000533123 CHMP2BQ9UQN3 213 aa18.83■□□□□ 0.6
SMPD1-208ENST00000533123 NUMBLQ9Y6R0 609 aa18.83■□□□□ 0.6
SMPD1-208ENST00000533123 CHD5Q8TDI0 1954 aa18.83■□□□□ 0.6
SMPD1-208ENST00000533123 A0A087WUV0 522 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-208ENST00000533123 ILVBLA1L0T0 632 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 J3KR12 359 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 IVLP07476 585 aa18.82■□□□□ 0.6
SMPD1-208ENST00000533123 MZF1P28698 734 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-208ENST00000533123 SSTR1P30872 391 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms