RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 THAP2Q9H0W7 228 aa23.45■■□□□ 1.34
CAPN1-222ENST00000532285 TNKS2Q9H2K2 1166 aa23.45■■□□□ 1.34
CAPN1-222ENST00000532285 KDM4CQ9H3R0 1056 aa23.45■■□□□ 1.34
CAPN1-222ENST00000532285 DHX35Q9H5Z1 703 aaKnown RBP23.45■■□□□ 1.34
CAPN1-222ENST00000532285 OSGEPQ9NPF4 335 aa23.45■■□□□ 1.34
CAPN1-222ENST00000532285 GPATCH2LQ9NWQ4 482 aa23.45■■□□□ 1.34
CAPN1-222ENST00000532285 KDELR3O43731 214 aa23.44■■□□□ 1.34
CAPN1-222ENST00000532285 LRCH4O75427 683 aa23.44■■□□□ 1.34
CAPN1-222ENST00000532285 ZNF821O75541 412 aaPredicted RBP23.44■■□□□ 1.34
CAPN1-222ENST00000532285 PRNPP04156 253 aa23.44■■□□□ 1.34
CAPN1-222ENST00000532285 IGHV4-34P06331 123 aa23.44■■□□□ 1.34
CAPN1-222ENST00000532285 METAP1P53582 386 aa23.44■■□□□ 1.34
CAPN1-222ENST00000532285 ADPRHP54922 357 aa23.44■■□□□ 1.34
CAPN1-222ENST00000532285 TSR1Q2NL82 804 aaKnown RBP23.44■■□□□ 1.34
CAPN1-222ENST00000532285 UAP1L1Q3KQV9 507 aa23.44■■□□□ 1.34
CAPN1-222ENST00000532285 ISG20Q96AZ6 181 aaKnown RBP23.44■■□□□ 1.34
CAPN1-222ENST00000532285 PEBP4Q96S96 227 aa23.44■■□□□ 1.34
CAPN1-222ENST00000532285 SNRNP25Q9BV90 132 aaKnown RBP23.44■■□□□ 1.34
CAPN1-222ENST00000532285 NOL6Q9H6R4 1146 aaKnown RBP23.44■■□□□ 1.34
CAPN1-222ENST00000532285 ZNHIT6Q9NWK9 470 aaKnown RBP23.44■■□□□ 1.34
CAPN1-222ENST00000532285 TPX2Q9ULW0 747 aaKnown RBP23.44■■□□□ 1.34
CAPN1-222ENST00000532285 ZSCAN5CA6NGD5 496 aaPredicted RBP23.43■■□□□ 1.34
CAPN1-222ENST00000532285 CD160O95971 181 aa23.43■■□□□ 1.34
CAPN1-222ENST00000532285 CYP1A2P05177 515 aa23.43■■□□□ 1.34
CAPN1-222ENST00000532285 CTSLP07711 333 aa23.43■■□□□ 1.34
CAPN1-222ENST00000532285 PCK1P35558 622 aa23.43■■□□□ 1.34
CAPN1-222ENST00000532285 EIF4A3P38919 411 aaKnown RBP23.43■■□□□ 1.34
CAPN1-222ENST00000532285 CCR5P51681 352 aa23.43■■□□□ 1.34
CAPN1-222ENST00000532285 AFF3P51826 1226 aaKnown RBP23.43■■□□□ 1.34
CAPN1-222ENST00000532285 CCDC15Q0P6D6 951 aa23.43■■□□□ 1.34
CAPN1-222ENST00000532285 CNTN1Q12860 1018 aa23.43■■□□□ 1.34
CAPN1-222ENST00000532285 PIGHQ14442 188 aaPredicted RBP23.43■■□□□ 1.34
CAPN1-222ENST00000532285 PPM1JQ5JR12 505 aa23.43■■□□□ 1.34
CAPN1-222ENST00000532285 ZNF354CQ86Y25 554 aa23.43■■□□□ 1.34
CAPN1-222ENST00000532285 UMODL1-AS1Q8N2C9 162 aa23.43■■□□□ 1.34
CAPN1-222ENST00000532285 MINDY1Q8N5J2 469 aa23.43■■□□□ 1.34
CAPN1-222ENST00000532285 IL36AQ9UHA7 158 aa23.43■■□□□ 1.34
CAPN1-222ENST00000532285 CNOT1A5YKK6 2376 aaKnown RBP23.43■■□□□ 1.34
CAPN1-222ENST00000532285 TP53BP1Q12888 1972 aaPredicted RBP23.43■■□□□ 1.34
CAPN1-222ENST00000532285 TBC1D3DA0A087WVF3 549 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 TBC1D3IA0A087WXS9 549 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 TBC1D3EA0A087X179 549 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 TBC1D3KA0A087X1G2 549 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 TBC1D3FA6NER0 549 aaPredicted RBP23.42■■□□□ 1.34
CAPN1-222ENST00000532285 TBC1D3LB9A6J9 549 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 EEF2KO00418 725 aaKnown RBP23.42■■□□□ 1.34
CAPN1-222ENST00000532285 PLK4O00444 970 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 KPNA3O00505 521 aaPredicted RBP23.42■■□□□ 1.34
CAPN1-222ENST00000532285 OPHN1O60890 802 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 TBC1D3HP0C7X1 549 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 DNA2P51530 1060 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 ZNF135P52742 658 aaPredicted RBP23.42■■□□□ 1.34
CAPN1-222ENST00000532285 GRIK2Q13002 908 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 CA9Q16790 459 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 POM121L1PQ3SYA9 428 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 PARP15Q460N3 678 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 CARD16Q5EG05 197 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 TBC1D3GQ6DHY5 549 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 TBC1D3CQ6IPX1 549 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 DPY19L3Q6ZPD9 716 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 CYP4V2Q6ZWL3 525 aaPredicted RBP23.42■■□□□ 1.34
CAPN1-222ENST00000532285 PLPP6Q8IY26 295 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 TBC1D3Q8IZP1 549 aaPredicted RBP23.42■■□□□ 1.34
CAPN1-222ENST00000532285 CHST14Q8NCH0 376 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 NUP85Q9BW27 656 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 TM9SF3Q9HD45 589 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 DYRK4Q9NR20 520 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 IP6K2Q9UHH9 426 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 NENFQ9UMX5 172 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 FCF1Q9Y324 198 aaKnown RBP23.42■■□□□ 1.34
CAPN1-222ENST00000532285 ACTL7AQ9Y615 435 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 DOCK9Q9BZ29 2069 aa23.42■■□□□ 1.34
CAPN1-222ENST00000532285 A0A1W2PPC4 97 aa23.41■■□□□ 1.34
CAPN1-222ENST00000532285 C10orf142B7Z368 130 aa23.41■■□□□ 1.34
CAPN1-222ENST00000532285 RASA4BC9J798 803 aa23.41■■□□□ 1.34
CAPN1-222ENST00000532285 RASA4O43374 803 aa23.41■■□□□ 1.34
CAPN1-222ENST00000532285 PLRG1O43660 514 aaKnown RBP23.41■■□□□ 1.34
CAPN1-222ENST00000532285 TEAD4Q15561 434 aa23.41■■□□□ 1.34
CAPN1-222ENST00000532285 SLC18A3Q16572 532 aa23.41■■□□□ 1.34
CAPN1-222ENST00000532285 ARSIQ5FYB1 569 aa23.41■■□□□ 1.34
CAPN1-222ENST00000532285 AGBL4Q5VU57 503 aa23.41■■□□□ 1.34
CAPN1-222ENST00000532285 KCTD15Q96SI1 283 aaPredicted RBP23.41■■□□□ 1.34
CAPN1-222ENST00000532285 HEPHQ9BQS7 1158 aa23.41■■□□□ 1.34
CAPN1-222ENST00000532285 ORAI3Q9BRQ5 295 aa23.41■■□□□ 1.34
CAPN1-222ENST00000532285 DNAAF2Q9NVR5 837 aaKnown RBP23.41■■□□□ 1.34
CAPN1-222ENST00000532285 ANAPC7Q9UJX3 599 aa23.41■■□□□ 1.34
CAPN1-222ENST00000532285 TMEM131Q92545 1883 aa23.41■■□□□ 1.34
CAPN1-222ENST00000532285 SSU72P8A0A1W2PR75 194 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 MED19A0JLT2 244 aaPredicted RBP23.4■■□□□ 1.34
CAPN1-222ENST00000532285 DAPK3O43293 454 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 BUB1O43683 1085 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 LEFTY1O75610 366 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 GRIA4P48058 902 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 HCAR3P49019 387 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 CSNK1EP49674 416 aaKnown RBP23.4■■□□□ 1.34
CAPN1-222ENST00000532285 NDST2P52849 883 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 MAPK8IP2Q13387 824 aaPredicted RBP23.4■■□□□ 1.34
CAPN1-222ENST00000532285 SERINC3Q13530 473 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 BOLA3Q53S33 107 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 PPP6R3Q5H9R7 873 aaPredicted RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms