RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 KIF1BPQ96EK5 621 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 BAG1Q99933 345 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-211ENST00000525970 NPLQ9BXD5 320 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-211ENST00000525970 C1QTNF7Q9BXJ2 289 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 SCPEP1Q9HB40 452 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 SNX15Q9NRS6 342 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 ARPP21Q9UBL0 812 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-211ENST00000525970 RPS6KA6Q9UK32 745 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 CORO1CQ9ULV4 474 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-211ENST00000525970 VPS4AQ9UN37 437 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 TMEM5Q9Y2B1 443 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 PKP3Q9Y446 797 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 WNT6Q9Y6F9 365 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 SPATA31A1Q5TZJ5 1347 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 A0A1W2PQF6 199 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 C16orf96A6NNT2 1141 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 H0YIZ8 118 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 H7C0S8 307 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 PRYO14603 147 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 BEST1O76090 585 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 EIF2S1P05198 315 aaKnown RBP4.86□□□□□ -1.63
CSDE1-211ENST00000525970 SPARCP09486 303 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 PKMP14618 531 aaKnown RBP4.86□□□□□ -1.63
CSDE1-211ENST00000525970 ATF7P17544 494 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-211ENST00000525970 NFKBIAP25963 317 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 CPOXP36551 454 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 UBA7P41226 1012 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 SHC2P98077 582 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 CFHR3Q02985 330 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 CDC16Q13042 620 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 STK4Q13043 487 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 TBC1D25Q3MII6 688 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 RNASE12Q5GAN4 147 aaKnown RBP4.86□□□□□ -1.63
CSDE1-211ENST00000525970 KIAA1614Q5VZ46 1190 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 CDC73Q6P1J9 531 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 TMEM81Q6P7N7 255 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 PTF1AQ7RTS3 328 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 C1QL2Q7Z5L3 287 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 SETD9Q8NE22 299 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 AKAP1Q92667 903 aaKnown RBP eCLIP4.86□□□□□ -1.63
CSDE1-211ENST00000525970 ARHGEF2Q92974 986 aaKnown RBP4.86□□□□□ -1.63
CSDE1-211ENST00000525970 KLHL29Q96CT2 875 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 CALML4Q96GE6 196 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 RADILQ96JH8 1075 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 STRA6Q9BX79 667 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 FSD1LQ9BXM9 530 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 SFXN1Q9H9B4 322 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 DUSP22Q9NRW4 184 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 SH3BP4Q9P0V3 963 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 RNF7Q9UBF6 113 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 LIMA1Q9UHB6 759 aaKnown RBP4.86□□□□□ -1.63
CSDE1-211ENST00000525970 CDH22Q9UJ99 828 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 ADAM21Q9UKJ8 722 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 ADAM18Q9Y3Q7 739 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 ZNF711Q9Y462 761 aa4.86□□□□□ -1.63
CSDE1-211ENST00000525970 FRMD3A2A2Y4 597 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 TAF4O00268 1085 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 BCAT2O15382 392 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-211ENST00000525970 NPSP0C0P6 89 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 VDRP11473 427 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 RARGP13631 454 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 APEHP13798 732 aaKnown RBP4.85□□□□□ -1.63
CSDE1-211ENST00000525970 NDUFS1P28331 727 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 SLC8A1P32418 973 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 NNMTP40261 264 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 PBX3P40426 434 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 ABCG1P45844 678 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 ZNF84P51523 738 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 EFNA5P52803 228 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 ADPRHP54922 357 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 OLR1P78380 273 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 DMWDQ09019 674 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 IL13RA2Q14627 380 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 IRF3Q14653 427 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 MED22Q15528 200 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 AARS2Q5JTZ9 985 aaKnown RBP4.85□□□□□ -1.63
CSDE1-211ENST00000525970 DENND2CQ68D51 928 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 CEP85Q6P2H3 762 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 ZNF804AQ7Z570 1209 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 ADGRF2Q8IZF7 708 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 ADPRHL1Q8NDY3 354 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 INTS12Q96CB8 462 aaKnown RBP4.85□□□□□ -1.63
CSDE1-211ENST00000525970 ZNF845Q96IR2 970 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-211ENST00000525970 KLHL15Q96M94 604 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 YME1L1Q96TA2 773 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 GATA5Q9BWX5 397 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-211ENST00000525970 SLC29A3Q9BZD2 475 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 GLIS2Q9BZE0 524 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-211ENST00000525970 TRIM31Q9BZY9 425 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 USP29Q9HBJ7 922 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 CFDP1Q9UEE9 299 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-211ENST00000525970 ZNF112Q9UJU3 913 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 ADAMTS5Q9UNA0 930 aa4.85□□□□□ -1.63
CSDE1-211ENST00000525970 MAGED1Q9Y5V3 778 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-211ENST00000525970 TEX13CA0A0J9YWL9 993 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 C17orf113A0A1B0GUU1 675 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 CGB1A6NKQ9 187 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 A8MZ25 164 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 UBE2CO00762 179 aa4.84□□□□□ -1.63
CSDE1-211ENST00000525970 SH2B2O14492 632 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms