RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 DPP3Q9NY33 737 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 USP25Q9UHP3 1055 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 EIF2B4Q9UI10 523 aaKnown RBP5.51□□□□□ -1.53
SVIP-202ENST00000525670 KCNG1Q9UIX4 513 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 TMPRSS11EQ9UL52 423 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 UBQLN1Q9UMX0 589 aaKnown RBP5.51□□□□□ -1.53
SVIP-202ENST00000525670 AGAP1Q9UPQ3 857 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 CDY1Q9Y6F8 540 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 TRIOO75962 3097 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 BDP1A6H8Y1 2624 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 PVALEFA0A1B0GWK0 134 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 FAM170AA1A519 330 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 ZNF233A6NK53 670 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 LRRIQ3A6PVS8 624 aaPredicted RBP5.5□□□□□ -1.53
SVIP-202ENST00000525670 CALUO43852 315 aaPredicted RBP5.5□□□□□ -1.53
SVIP-202ENST00000525670 GLUD1P00367 558 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 TNNC2P02585 160 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 GYPEP15421 78 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 OR1D2P34982 312 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 PIK3CAP42336 1068 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 LSSP48449 732 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 PSMC1P62191 440 aaKnown RBP5.5□□□□□ -1.53
SVIP-202ENST00000525670 NTHL1P78549 312 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 UBE3AQ05086 875 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 MGAT5Q09328 741 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 BMT2Q1RMZ1 405 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 USP41Q3LFD5 358 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 CTXN3Q4LDR2 81 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 SPOPLQ6IQ16 392 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 ALKAL1Q6UXT8 129 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 GET4Q7L5D6 327 aaPredicted RBP5.5□□□□□ -1.53
SVIP-202ENST00000525670 USP37Q86T82 979 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 GLB1L2Q8IW92 636 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 FAM186BQ8IYM0 893 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 CSGALNACT2Q8N6G5 542 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 MRPL43Q8N983 215 aaKnown RBP5.5□□□□□ -1.53
SVIP-202ENST00000525670 XXYLT1Q8NBI6 393 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 OR2W6PQ8NHA6 318 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 NELFBQ8WX92 580 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 ING5Q8WYH8 240 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 PABPC5Q96DU9 382 aaKnown RBP5.5□□□□□ -1.53
SVIP-202ENST00000525670 CCDC34Q96HJ3 373 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 ANKRD36BP1Q96IX9 119 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 RPGRIP1Q96KN7 1286 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 SENP8Q96LD8 212 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 CGRRF1Q99675 332 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 PI4K2AQ9BTU6 479 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 SLC46A2Q9BY10 475 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 RHOBTB2Q9BYZ6 727 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 NUP62CLQ9H1M0 184 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 KCTD10Q9H3F6 313 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 CLSTN2Q9H4D0 955 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 SMYD3Q9H7B4 428 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 LMBRD1Q9NUN5 540 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 SIX4Q9UIU6 781 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 CD207Q9UJ71 328 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 PACSIN3Q9UKS6 424 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 CLCA2Q9UQC9 943 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 LZTS1Q9Y250 596 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 USP15Q9Y4E8 981 aaPredicted RBP5.5□□□□□ -1.53
SVIP-202ENST00000525670 STYXL1Q9Y6J8 313 aa5.5□□□□□ -1.53
SVIP-202ENST00000525670 DENND4AQ7Z401 1863 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 WDR27A2RRH5 827 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 AHRRA9YTQ3 701 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 CYB561D2O14569 222 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 XPOTO43592 962 aaKnown RBP5.49□□□□□ -1.53
SVIP-202ENST00000525670 AKAP3O75969 853 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 IL18RAPO95256 599 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 LTA4HP09960 611 aaKnown RBP5.49□□□□□ -1.53
SVIP-202ENST00000525670 ODC1P11926 461 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 BMP5P22003 454 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 GCLMP48507 274 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 TAF6P49848 677 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 CLCN4P51793 760 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 MRPS5P82675 430 aaKnown RBP5.49□□□□□ -1.53
SVIP-202ENST00000525670 ROR1Q01973 937 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 LRMPQ12912 555 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 KCNB1Q14721 858 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 SEPT7Q16181 437 aaKnown RBP5.49□□□□□ -1.53
SVIP-202ENST00000525670 ZNF699Q32M78 642 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 DPCR1Q3MIW9 517 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 CCDC40Q4G0X9 1142 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 SLC39A12Q504Y0 691 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 XKR4Q5GH76 650 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 LIN9Q5TKA1 542 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 ZNF658Q5TYW1 1059 aaPredicted RBP5.49□□□□□ -1.53
SVIP-202ENST00000525670 SDHAF4Q5VUM1 108 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 SPATA1Q5VX52 437 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 WSCD1Q658N2 575 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 ZNF280DQ6N043 979 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 ANKRD54Q6NXT1 300 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 CAVIN1Q6NZI2 390 aaKnown RBP5.49□□□□□ -1.53
SVIP-202ENST00000525670 SYCE2Q6PIF2 218 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 DCLRE1AQ6PJP8 1040 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 GPRIN1Q7Z2K8 1008 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 C11orf74Q86VG3 221 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 LYSMD2Q8IV50 215 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 GPR150Q8NGU9 434 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 OR10T2Q8NGX3 314 aa5.49□□□□□ -1.53
SVIP-202ENST00000525670 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms