RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 CFIP05156 583 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 IGHV4-34P06331 123 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 CD48P09326 243 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 TMEM253P0C7T8 217 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 ERCC2P18074 760 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 C5AR1P21730 350 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 CHRNA3P32297 505 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 DNA2P51530 1060 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 ADPRHP54922 357 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 PPP2CBP62714 309 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 PPP2CAP67775 309 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 CNTN1Q12860 1018 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 MMRN1Q13201 1228 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 DPYSL2Q16555 572 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 ATXN7L2Q5T6C5 722 aaPredicted RBP18.21■□□□□ 0.51
CLK4-211ENST00000522556 RETSATQ6NUM9 610 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 NCEH1Q6PIU2 408 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 LAYNQ6UX15 382 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 ARHGAP36Q6ZRI8 547 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 USP30Q70CQ3 517 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 ZNF354CQ86Y25 554 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 ARHGAP12Q8IWW6 846 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 UMODL1-AS1Q8N2C9 162 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 CTNNBL1Q8WYA6 563 aaPredicted RBP18.21■□□□□ 0.51
CLK4-211ENST00000522556 BIRC7Q96CA5 298 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 CCDC42Q96M95 316 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 OMDQ99983 421 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 ORAI3Q9BRQ5 295 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 SLC39A8Q9C0K1 460 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 MIR1-1HGQ9H1L0 117 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 CATSPERBQ9H7T0 1116 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 EBF2Q9HAK2 575 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 PCDH18Q9HCL0 1135 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.21■□□□□ 0.51
CLK4-211ENST00000522556 WASF2Q9Y6W5 498 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 C10orf142B7Z368 130 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 J3KR12 359 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 MYO1FO00160 1098 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 KHNYNO15037 678 aaKnown RBP18.2■□□□□ 0.5
CLK4-211ENST00000522556 KDELR3O43731 214 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 FSBPO95073 299 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 ADH1BP00325 375 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 AMPD1P23109 780 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 ID4P47928 161 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 CLCN6P51797 869 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 CCNHP51946 323 aaPredicted RBP18.2■□□□□ 0.5
CLK4-211ENST00000522556 SERINC3Q13530 473 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 ACAP1Q15027 740 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 TSR1Q2NL82 804 aaKnown RBP18.2■□□□□ 0.5
CLK4-211ENST00000522556 AGBL4Q5VU57 503 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.2■□□□□ 0.5
CLK4-211ENST00000522556 CADM4Q8NFZ8 388 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 C1orf216Q8TAB5 229 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 DNASE2BQ8WZ79 361 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 FAM131CQ96AQ9 280 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 PDFQ9HBH1 243 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 CAPN10Q9HC96 672 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 DLL3Q9NYJ7 618 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 TMEM131Q92545 1883 aa18.2■□□□□ 0.5
CLK4-211ENST00000522556 CDX4O14627 284 aaPredicted RBP18.19■□□□□ 0.5
CLK4-211ENST00000522556 ALOX15BO15296 676 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 BUB1O43683 1085 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 LEFTY1O75610 366 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 TMCC1O94876 653 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 PROSCO94903 275 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 ETFBP38117 255 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 SSR1P43307 286 aaKnown RBP18.19■□□□□ 0.5
CLK4-211ENST00000522556 TAS2R38P59533 333 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 ARSIQ5FYB1 569 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 STPG1Q5TH74 334 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 AFMIDQ63HM1 303 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 KIAA0895LQ68EN5 471 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 SLC23A3Q6PIS1 610 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 POLNQ7Z5Q5 900 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 PCDH20Q8N6Y1 951 aaKnown RBP18.19■□□□□ 0.5
CLK4-211ENST00000522556 OR14C36Q8NHC7 312 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 SLC35G2Q8TBE7 412 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 TSC1Q92574 1164 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 FOXJ1Q92949 421 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 EXOC2Q96KP1 924 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 CSPG4P5Q96PW8 444 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 RETREG1Q9H6L5 497 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 SGK2Q9HBY8 427 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 UVRAGQ9P2Y5 699 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 EVLQ9UI08 416 aaPredicted RBP18.19■□□□□ 0.5
CLK4-211ENST00000522556 CDV3Q9UKY7 258 aaKnown RBP18.19■□□□□ 0.5
CLK4-211ENST00000522556 FZD4Q9ULV1 537 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 SCML1Q9UN30 329 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 NCKAP1Q9Y2A7 1128 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 SHROOM3Q8TF72 1996 aa18.19■□□□□ 0.5
CLK4-211ENST00000522556 DCDC2BA2VCK2 349 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 SOWAHDA6NJG2 315 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 KPNA3O00505 521 aaPredicted RBP18.18■□□□□ 0.5
CLK4-211ENST00000522556 WNT9AO14904 365 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 DAPK3O43293 454 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 ENGP17813 658 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 HTR7P34969 479 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 MAPK8P45983 427 aa18.18■□□□□ 0.5
CLK4-211ENST00000522556 PAPOLAP51003 745 aaKnown RBP18.18■□□□□ 0.5
CLK4-211ENST00000522556 ARSEP51690 589 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms