RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 ISCUQ9H1K1 167 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 MAGEH1Q9H213 219 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 TNKS2Q9H2K2 1166 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 KDM4CQ9H3R0 1056 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 SLC32A1Q9H598 525 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 NOL6Q9H6R4 1146 aaKnown RBP9.55□□□□□ -0.88
HDAC3-215ENST00000519474 DNAI1Q9UI46 699 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 NEU3Q9UQ49 428 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 FARP1Q9Y4F1 1045 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-215ENST00000519474 CXorf51AA0A1B0GTR3 108 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 SPAARA0A1B0GVQ0 90 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 A0A1W2PR77 199 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 WASH4PA8MWX3 477 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 VILLO15195 856 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 LATO43561 262 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 PLRG1O43660 514 aaKnown RBP9.54□□□□□ -0.88
HDAC3-215ENST00000519474 KDELR3O43731 214 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 CBFA2T3O75081 653 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 ZNF883P0CG24 379 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 GRIA4P48058 902 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 MAPKAPK2P49137 400 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 CLCN6P51797 869 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 AFF3P51826 1226 aaKnown RBP9.54□□□□□ -0.88
HDAC3-215ENST00000519474 ADPRHP54922 357 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 SHC2P98077 582 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 KLHL30Q0D2K2 578 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 CARD16Q5EG05 197 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 PRAMEF14Q5SWL7 426 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 AGBL4Q5VU57 503 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 RETSATQ6NUM9 610 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 DCUN1D2Q6PH85 259 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 IL27RAQ6UWB1 636 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 LAYNQ6UX15 382 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 DSG4Q86SJ6 1040 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 PLPP6Q8IY26 295 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 SDR16C5Q8N3Y7 309 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 CPLX3Q8WVH0 158 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 ISG20Q96AZ6 181 aaKnown RBP9.54□□□□□ -0.88
HDAC3-215ENST00000519474 TBC1D31Q96DN5 1066 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 TRIM7Q9C029 511 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 KLC2Q9H0B6 622 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 ATP13A1Q9HD20 1204 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 TM7SF3Q9NS93 570 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 PARVAQ9NVD7 372 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 FEZ2Q9UHY8 353 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-215ENST00000519474 CAPN11Q9UMQ6 739 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 DNAH14Q0VDD8 3507 aa9.54□□□□□ -0.88
HDAC3-215ENST00000519474 KNL1Q8NG31 2342 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 DOCK9Q9BZ29 2069 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 C1QTNF3-AMACRE9PGA6 284 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 H0Y8X5 98 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 SLC7A4O43246 635 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 LEFTY1O75610 366 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 CD38P28907 300 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 CTSKP43235 329 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 SERPINH1P50454 418 aaKnown RBP9.53□□□□□ -0.88
HDAC3-215ENST00000519474 PPP2CBP62714 309 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 PPP2CAP67775 309 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 ZNF252P-AS1Q0IIN9 211 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 POLD3Q15054 466 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-215ENST00000519474 TEAD4Q15561 434 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 TRIP6Q15654 476 aaKnown RBP9.53□□□□□ -0.88
HDAC3-215ENST00000519474 CA9Q16790 459 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 ZNF423Q2M1K9 1284 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 SKOR2Q2VWA4 1001 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-215ENST00000519474 ZSCAN23Q3MJ62 389 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 ERMARDQ5T6L9 678 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 PIP5KL1Q5T9C9 394 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 PPP1R2P3Q6NXS1 205 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 LEKR1Q6ZMV7 388 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 TMC6Q7Z403 805 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 PRPF39Q86UA1 669 aaKnown RBP9.53□□□□□ -0.88
HDAC3-215ENST00000519474 SYN2Q92777 582 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-215ENST00000519474 SLC6A18Q96N87 628 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 HEPHQ9BQS7 1158 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 CEP44Q9C0F1 390 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 GPATCH2LQ9NWQ4 482 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 CNOT8Q9UFF9 292 aaKnown RBP9.53□□□□□ -0.88
HDAC3-215ENST00000519474 FNDC3AQ9Y2H6 1198 aaKnown RBP9.53□□□□□ -0.88
HDAC3-215ENST00000519474 FCF1Q9Y324 198 aaKnown RBP9.53□□□□□ -0.88
HDAC3-215ENST00000519474 WASF2Q9Y6W5 498 aa9.53□□□□□ -0.88
HDAC3-215ENST00000519474 CNOT1A5YKK6 2376 aaKnown RBP9.52□□□□□ -0.88
HDAC3-215ENST00000519474 A0A1W2PQJ5 194 aa9.52□□□□□ -0.89
HDAC3-215ENST00000519474 ANKRD62A6NC57 917 aa9.52□□□□□ -0.89
HDAC3-215ENST00000519474 TLR4O00206 839 aa9.52□□□□□ -0.89
HDAC3-215ENST00000519474 KPNA3O00505 521 aaPredicted RBP9.52□□□□□ -0.89
HDAC3-215ENST00000519474 ATMINO43313 823 aaPredicted RBP9.52□□□□□ -0.89
HDAC3-215ENST00000519474 CREB3O43889 395 aa9.52□□□□□ -0.89
HDAC3-215ENST00000519474 CER1O95813 267 aa9.52□□□□□ -0.89
HDAC3-215ENST00000519474 PRNPP04156 253 aa9.52□□□□□ -0.89
HDAC3-215ENST00000519474 SPINK2P20155 84 aa9.52□□□□□ -0.89
HDAC3-215ENST00000519474 PSMA2P25787 234 aa9.52□□□□□ -0.89
HDAC3-215ENST00000519474 EPHB2P29323 1055 aa9.52□□□□□ -0.89
HDAC3-215ENST00000519474 MAT2AP31153 395 aaKnown RBP9.52□□□□□ -0.89
HDAC3-215ENST00000519474 GKP32189 559 aa9.52□□□□□ -0.89
HDAC3-215ENST00000519474 ETFBP38117 255 aa9.52□□□□□ -0.89
HDAC3-215ENST00000519474 SSR1P43307 286 aaKnown RBP9.52□□□□□ -0.89
HDAC3-215ENST00000519474 DNA2P51530 1060 aa9.52□□□□□ -0.89
HDAC3-215ENST00000519474 AIF1P55008 147 aa9.52□□□□□ -0.89
HDAC3-215ENST00000519474 YBEYP58557 167 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms