RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 DFFAO00273 331 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 PJA2O43164 708 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 SPOPO43791 374 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 TMCC1O94876 653 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 HOXD11P31277 338 aaPredicted RBP22.4■■□□□ 1.18
VEGFA-217ENST00000518538 SERPINB6P35237 376 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 DHPSP49366 369 aaPredicted RBP22.4■■□□□ 1.18
VEGFA-217ENST00000518538 INO80DQ53TQ3 878 aaPredicted RBP22.4■■□□□ 1.18
VEGFA-217ENST00000518538 FAM46CQ5VWP2 391 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 C11orf63Q6NUN7 778 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 LEKR1Q6ZMV7 388 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 KIAA1328Q86T90 577 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 FAM124AQ86V42 546 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 RHOT1Q8IXI2 618 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 PLPP6Q8IY26 295 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 TXLNBQ8N3L3 684 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 PDFQ9HBH1 243 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 FBXL12Q9NXK8 326 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 SALL4Q9UJQ4 1053 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 HYOU1Q9Y4L1 999 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 ALG6Q9Y672 507 aa22.4■■□□□ 1.18
VEGFA-217ENST00000518538 PRAMEF11O60813 436 aa22.39■■□□□ 1.17
VEGFA-217ENST00000518538 CHRNA3P32297 505 aa22.39■■□□□ 1.17
VEGFA-217ENST00000518538 DNA2P51530 1060 aa22.39■■□□□ 1.17
VEGFA-217ENST00000518538 ANKRD20A8PQ5CZ79 823 aa22.39■■□□□ 1.17
VEGFA-217ENST00000518538 CARD16Q5EG05 197 aa22.39■■□□□ 1.17
VEGFA-217ENST00000518538 DPY19L3Q6ZPD9 716 aa22.39■■□□□ 1.17
VEGFA-217ENST00000518538 AADATQ8N5Z0 425 aa22.39■■□□□ 1.17
VEGFA-217ENST00000518538 CCDC112Q8NEF3 446 aa22.39■■□□□ 1.17
VEGFA-217ENST00000518538 TPCN2Q8NHX9 752 aa22.39■■□□□ 1.17
VEGFA-217ENST00000518538 PIP4K2CQ8TBX8 421 aa22.39■■□□□ 1.17
VEGFA-217ENST00000518538 GANCQ8TET4 914 aa22.39■■□□□ 1.17
VEGFA-217ENST00000518538 RAPGEF5Q92565 580 aa22.39■■□□□ 1.17
VEGFA-217ENST00000518538 FAF2Q96CS3 445 aa22.39■■□□□ 1.17
VEGFA-217ENST00000518538 LACRTQ9GZZ8 138 aa22.39■■□□□ 1.17
VEGFA-217ENST00000518538 BTBD1Q9H0C5 482 aa22.39■■□□□ 1.17
VEGFA-217ENST00000518538 UBA2Q9UBT2 640 aaPredicted RBP22.39■■□□□ 1.17
VEGFA-217ENST00000518538 SARDHQ9UL12 918 aa22.39■■□□□ 1.17
VEGFA-217ENST00000518538 FZD4Q9ULV1 537 aa22.39■■□□□ 1.17
VEGFA-217ENST00000518538 SPAG17Q6Q759 2223 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 A0A1W2PP55 124 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 LRRD1A4D1F6 860 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 ZNF487B1APH4 448 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 J3KR12 359 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 LRP3O75074 770 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 GSRP00390 522 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 PRNPP04156 253 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 CTSLP07711 333 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 KDELR1P24390 212 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 PTGER3P43115 390 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 LYSMD4Q5XG99 296 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 VSIG1Q86XK7 387 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 DCLK2Q8N568 766 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 NETO2Q8NC67 525 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 CHST14Q8NCH0 376 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 TMIEQ8NEW7 156 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 CADM4Q8NFZ8 388 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 PCDH19Q8TAB3 1148 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 ZNF419Q96HQ0 510 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-217ENST00000518538 OMDQ99983 421 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 DESI2Q9BSY9 194 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 GPR174Q9BXC1 333 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 TM6SF2Q9BZW4 377 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 ARRDC1-AS1Q9H2J1 176 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 GOLPH3Q9H4A6 298 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 SP110Q9HB58 689 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 SGK2Q9HBY8 427 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 DDX56Q9NY93 547 aaKnown RBP22.38■■□□□ 1.17
VEGFA-217ENST00000518538 SERGEFQ9UGK8 458 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 IL36AQ9UHA7 158 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 DUSP10Q9Y6W6 482 aa22.38■■□□□ 1.17
VEGFA-217ENST00000518538 BCLAF3A2AJT9 711 aaKnown RBP22.37■■□□□ 1.17
VEGFA-217ENST00000518538 PSTPIP1O43586 416 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 RNASEH2AO75792 299 aaKnown RBP22.37■■□□□ 1.17
VEGFA-217ENST00000518538 ACSL1P33121 698 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 DRD3P35462 400 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 CCNHP51946 323 aaPredicted RBP22.37■■□□□ 1.17
VEGFA-217ENST00000518538 SNRPD1P62314 119 aaKnown RBP22.37■■□□□ 1.17
VEGFA-217ENST00000518538 CREB5Q02930 508 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 ZNF33AQ06730 810 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 NCBP2-AS2Q69YL0 99 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 ARMCX6Q7L4S7 300 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 CYP2U1Q7Z449 544 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 DAAM2Q86T65 1068 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 SLC41A1Q8IVJ1 513 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 TP53INP2Q8IXH6 220 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 HDDC3Q8N4P3 179 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 DEFB119Q8N690 84 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 OR2AP1Q8NGE2 309 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 FOXJ1Q92949 421 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 HSPA12BQ96MM6 686 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 HEPHQ9BQS7 1158 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 PCED1AQ9H1Q7 454 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 NEUROG2Q9H2A3 272 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 HECAQ9UBI9 543 aaPredicted RBP22.37■■□□□ 1.17
VEGFA-217ENST00000518538 IPO11Q9UI26 975 aaKnown RBP22.37■■□□□ 1.17
VEGFA-217ENST00000518538 THADAQ6YHU6 1953 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 ABCA7Q8IZY2 2146 aa22.37■■□□□ 1.17
VEGFA-217ENST00000518538 C3orf70A6NLC5 250 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-217ENST00000518538 ARHGAP6O43182 974 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms