RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 LRRC6Q86X45 466 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 HJURPQ8NCD3 748 aaPredicted RBP20.46■□□□□ 0.87
TRIO-223ENST00000515710 CENPTQ96BT3 561 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 IMP4Q96G21 291 aaKnown RBP20.46■□□□□ 0.87
TRIO-223ENST00000515710 PDFQ9HBH1 243 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 VPS45Q9NRW7 570 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 SH3BP1Q9Y3L3 701 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 OBSL1O75147 1896 aa20.46■□□□□ 0.87
TRIO-223ENST00000515710 IQANK1A0A1B0GTG1 560 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 FAM159BA6NKW6 160 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 GFRA2O00451 464 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 ADRA1AP35348 466 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 CRADDP78560 199 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 GUCY1A3Q02108 690 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 ITKQ08881 620 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 GPM6BQ13491 265 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 SHHQ15465 462 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 ZNF449Q6P9G9 518 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 CCDC117Q8IWD4 279 aaPredicted RBP20.45■□□□□ 0.86
TRIO-223ENST00000515710 SRRM1Q8IYB3 904 aaKnown RBP20.45■□□□□ 0.86
TRIO-223ENST00000515710 BBS5Q8N3I7 341 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 CPXM2Q8N436 756 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 TMA16Q96EY4 203 aaKnown RBP20.45■□□□□ 0.86
TRIO-223ENST00000515710 SLC46A2Q9BY10 475 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 ZNF180Q9UJW8 692 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 MYO18AQ92614 2054 aaKnown RBP20.45■□□□□ 0.86
TRIO-223ENST00000515710 A0A0D9SEW6 157 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 XYLBO75191 536 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 BRAFP15056 766 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 HOXD9P28356 352 aaPredicted RBP20.45■□□□□ 0.86
TRIO-223ENST00000515710 OXCT1P55809 520 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 FRG1Q14331 258 aaKnown RBP20.45■□□□□ 0.86
TRIO-223ENST00000515710 RFTN1Q14699 578 aaPredicted RBP20.45■□□□□ 0.86
TRIO-223ENST00000515710 ARHGAP15Q53QZ3 475 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 CNPY4Q8N129 248 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 IPMKQ8NFU5 416 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 OR7D4Q8NG98 312 aa20.45■□□□□ 0.86
TRIO-223ENST00000515710 ACE2Q9BYF1 805 aaPredicted RBP20.45■□□□□ 0.86
TRIO-223ENST00000515710 MKI67P46013 3256 aaKnown RBP20.44■□□□□ 0.86
TRIO-223ENST00000515710 TBL1XO60907 577 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 RFPL2O75678 378 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 EPCAMP16422 314 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 GJA1P17302 382 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 NAB1Q13506 487 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 CRYMQ14894 314 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 LGSNQ5TDP6 509 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 FAM109BQ6ICB4 259 aaPredicted RBP20.44■□□□□ 0.86
TRIO-223ENST00000515710 ELMSAN1Q6PJG2 1045 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 CTAGE3PQ8IX95 158 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.44■□□□□ 0.86
TRIO-223ENST00000515710 PPM1NQ8N819 430 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 OR52K2Q8NGK3 314 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 CDKL2Q92772 493 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 APOL2Q9BQE5 337 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 SPON2Q9BUD6 331 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 FICDQ9BVA6 458 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 HCFC1R1Q9NWW0 138 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 CFAP97Q9P2B7 532 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 DNMT3BQ9UBC3 853 aaKnown RBP20.44■□□□□ 0.86
TRIO-223ENST00000515710 ARHGAP26Q9UNA1 814 aa20.44■□□□□ 0.86
TRIO-223ENST00000515710 MTCL1Q9Y4B5 1905 aaKnown RBP20.44■□□□□ 0.86
TRIO-223ENST00000515710 FAM237BA0A1B0GVD1 139 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 SRRM3A6NNA2 597 aaPredicted RBP20.43■□□□□ 0.86
TRIO-223ENST00000515710 USP1O94782 785 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 POU2F2P09086 479 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 CHN1P15882 459 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 MAGEA10P43363 369 aaPredicted RBP20.43■□□□□ 0.86
TRIO-223ENST00000515710 ZNF235Q14590 738 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 CERCAMQ5T4B2 595 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 GPR158Q5T848 1215 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 ARMC3Q5W041 872 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 TTC19Q6DKK2 380 aaPredicted RBP20.43■□□□□ 0.86
TRIO-223ENST00000515710 KDELC1Q6UW63 502 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 RANBP10Q6VN20 620 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 TMEM135Q86UB9 458 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 SHKBP1Q8TBC3 707 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 MDM1Q8TC05 714 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 MRGPRX2Q96LB1 330 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 TRIM56Q9BRZ2 755 aaKnown RBP20.43■□□□□ 0.86
TRIO-223ENST00000515710 FSD1LQ9BXM9 530 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 POLR1EQ9GZS1 481 aaKnown RBP20.43■□□□□ 0.86
TRIO-223ENST00000515710 TRABDQ9H4I3 376 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 TASP1Q9H6P5 420 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 SMYD2Q9NRG4 433 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 ZDHHC7Q9NXF8 308 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 RPS6KL1Q9Y6S9 549 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 CXorf49A8MYA2 514 aaPredicted RBP20.43■□□□□ 0.86
TRIO-223ENST00000515710 H0Y626 953 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 ATP9BO43861 1147 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 PMPCBO75439 489 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 RHOP08100 348 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 CCR2P41597 374 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 NIPAL4Q0D2K0 466 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 RNF219Q5W0B1 726 aaPredicted RBP20.43■□□□□ 0.86
TRIO-223ENST00000515710 CXorf57Q6NSI4 855 aaKnown RBP20.43■□□□□ 0.86
TRIO-223ENST00000515710 TRMT10BQ6PF06 316 aaKnown RBP20.43■□□□□ 0.86
TRIO-223ENST00000515710 TADA1Q96BN2 335 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 SMC6Q96SB8 1091 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 ATP13A1Q9HD20 1204 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 KCNK9Q9NPC2 374 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms