RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 RYBPQ8N488 228 aaPredicted RBP26.46■■□□□ 1.83
DDR1-279ENST00000515529 TPCN2Q8NHX9 752 aa26.46■■□□□ 1.83
DDR1-279ENST00000515529 RUBCNQ92622 972 aa26.46■■□□□ 1.83
DDR1-279ENST00000515529 ISG20Q96AZ6 181 aaKnown RBP26.46■■□□□ 1.83
DDR1-279ENST00000515529 LOXL4Q96JB6 756 aa26.46■■□□□ 1.83
DDR1-279ENST00000515529 LACRTQ9GZZ8 138 aa26.46■■□□□ 1.83
DDR1-279ENST00000515529 KLC2Q9H0B6 622 aa26.46■■□□□ 1.83
DDR1-279ENST00000515529 CD93Q9NPY3 652 aa26.46■■□□□ 1.83
DDR1-279ENST00000515529 ACTL7AQ9Y615 435 aa26.46■■□□□ 1.83
DDR1-279ENST00000515529 MID1O15344 667 aa26.45■■□□□ 1.82
DDR1-279ENST00000515529 PSTPIP1O43586 416 aa26.45■■□□□ 1.82
DDR1-279ENST00000515529 C5AR1P21730 350 aa26.45■■□□□ 1.82
DDR1-279ENST00000515529 KDELR1P24390 212 aa26.45■■□□□ 1.82
DDR1-279ENST00000515529 CARD16Q5EG05 197 aa26.45■■□□□ 1.82
DDR1-279ENST00000515529 AFMIDQ63HM1 303 aa26.45■■□□□ 1.82
DDR1-279ENST00000515529 LRRC8AQ8IWT6 810 aa26.45■■□□□ 1.82
DDR1-279ENST00000515529 ARHGAP12Q8IWW6 846 aa26.45■■□□□ 1.82
DDR1-279ENST00000515529 OR2A12Q8NGT7 310 aa26.45■■□□□ 1.82
DDR1-279ENST00000515529 TOE1Q96GM8 510 aaKnown RBP26.45■■□□□ 1.82
DDR1-279ENST00000515529 MAK16Q9BXY0 300 aaKnown RBP26.45■■□□□ 1.82
DDR1-279ENST00000515529 ETNK2Q9NVF9 386 aa26.45■■□□□ 1.82
DDR1-279ENST00000515529 FBXL12Q9NXK8 326 aa26.45■■□□□ 1.82
DDR1-279ENST00000515529 SBDSQ9Y3A5 250 aaKnown RBP eCLIP26.45■■□□□ 1.82
DDR1-279ENST00000515529 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa26.44■■□□□ 1.82
DDR1-279ENST00000515529 PRAMEF11O60813 436 aa26.44■■□□□ 1.82
DDR1-279ENST00000515529 TMCC1O94876 653 aa26.44■■□□□ 1.82
DDR1-279ENST00000515529 PRNPP04156 253 aa26.44■■□□□ 1.82
DDR1-279ENST00000515529 RETP07949 1114 aa26.44■■□□□ 1.82
DDR1-279ENST00000515529 CHRNA3P32297 505 aa26.44■■□□□ 1.82
DDR1-279ENST00000515529 SNRPD1P62314 119 aaKnown RBP26.44■■□□□ 1.82
DDR1-279ENST00000515529 INO80DQ53TQ3 878 aaPredicted RBP26.44■■□□□ 1.82
DDR1-279ENST00000515529 USP30Q70CQ3 517 aa26.44■■□□□ 1.82
DDR1-279ENST00000515529 ALYREFQ86V81 257 aaKnown RBP26.44■■□□□ 1.82
DDR1-279ENST00000515529 TMEFF1Q8IYR6 380 aa26.44■■□□□ 1.82
DDR1-279ENST00000515529 NETO2Q8NC67 525 aa26.44■■□□□ 1.82
DDR1-279ENST00000515529 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.44■■□□□ 1.82
DDR1-279ENST00000515529 RAPGEF5Q92565 580 aa26.44■■□□□ 1.82
DDR1-279ENST00000515529 TM6SF2Q9BZW4 377 aa26.44■■□□□ 1.82
DDR1-279ENST00000515529 GOLPH3Q9H4A6 298 aa26.44■■□□□ 1.82
DDR1-279ENST00000515529 MFHAS1Q9Y4C4 1052 aa26.44■■□□□ 1.82
DDR1-279ENST00000515529 DUSP10Q9Y6W6 482 aa26.44■■□□□ 1.82
DDR1-279ENST00000515529 CHD5Q8TDI0 1954 aa26.44■■□□□ 1.82
DDR1-279ENST00000515529 RNASEH2AO75792 299 aaKnown RBP26.43■■□□□ 1.82
DDR1-279ENST00000515529 CD160O95971 181 aa26.43■■□□□ 1.82
DDR1-279ENST00000515529 IGLV3-19P01714 112 aa26.43■■□□□ 1.82
DDR1-279ENST00000515529 C7P10643 843 aa26.43■■□□□ 1.82
DDR1-279ENST00000515529 IL4RP24394 825 aa26.43■■□□□ 1.82
DDR1-279ENST00000515529 RHOAP61586 193 aa26.43■■□□□ 1.82
DDR1-279ENST00000515529 SPDYCQ5MJ68 293 aa26.43■■□□□ 1.82
DDR1-279ENST00000515529 DPY19L3Q6ZPD9 716 aa26.43■■□□□ 1.82
DDR1-279ENST00000515529 ATPAF2Q8N5M1 289 aa26.43■■□□□ 1.82
DDR1-279ENST00000515529 PCDH19Q8TAB3 1148 aa26.43■■□□□ 1.82
DDR1-279ENST00000515529 PIP4K2CQ8TBX8 421 aa26.43■■□□□ 1.82
DDR1-279ENST00000515529 TSGA10Q9BZW7 698 aa26.43■■□□□ 1.82
DDR1-279ENST00000515529 BTBD1Q9H0C5 482 aa26.43■■□□□ 1.82
DDR1-279ENST00000515529 DYRK4Q9NR20 520 aa26.43■■□□□ 1.82
DDR1-279ENST00000515529 WSB2Q9NYS7 404 aaPredicted RBP26.43■■□□□ 1.82
DDR1-279ENST00000515529 IL36AQ9UHA7 158 aa26.43■■□□□ 1.82
DDR1-279ENST00000515529 IPO11Q9UI26 975 aaKnown RBP26.43■■□□□ 1.82
DDR1-279ENST00000515529 SALL4Q9UJQ4 1053 aa26.43■■□□□ 1.82
DDR1-279ENST00000515529 A0A1W2PP55 124 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 MACROD2A1Z1Q3 448 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 J3KR12 359 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 IGSF6O95976 241 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 GSRP00390 522 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 IL10RBQ08334 325 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 ARMCX6Q7L4S7 300 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 CYP2U1Q7Z449 544 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 VSIG1Q86XK7 387 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 HDDC3Q8N4P3 179 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 DEFB119Q8N690 84 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 KIAA1524Q8TCG1 905 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 GRIN3AQ8TCU5 1115 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 NSMCE1Q8WV22 266 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 FAF2Q96CS3 445 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 GDAP1L1Q96MZ0 367 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 HEPHQ9BQS7 1158 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 GPR174Q9BXC1 333 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 SGK2Q9HBY8 427 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 HECAQ9UBI9 543 aaPredicted RBP26.42■■□□□ 1.82
DDR1-279ENST00000515529 PPM1HQ9ULR3 514 aa26.42■■□□□ 1.82
DDR1-279ENST00000515529 ZNF487B1APH4 448 aa26.41■■□□□ 1.82
DDR1-279ENST00000515529 KPNA3O00505 521 aaPredicted RBP26.41■■□□□ 1.82
DDR1-279ENST00000515529 EPN2O95208 641 aa26.41■■□□□ 1.82
DDR1-279ENST00000515529 CCNHP51946 323 aaPredicted RBP26.41■■□□□ 1.82
DDR1-279ENST00000515529 CREB5Q02930 508 aa26.41■■□□□ 1.82
DDR1-279ENST00000515529 RAD51Q06609 339 aa26.41■■□□□ 1.82
DDR1-279ENST00000515529 CCDC15Q0P6D6 951 aa26.41■■□□□ 1.82
DDR1-279ENST00000515529 POM121L1PQ3SYA9 428 aa26.41■■□□□ 1.82
DDR1-279ENST00000515529 LYSMD4Q5XG99 296 aa26.41■■□□□ 1.82
DDR1-279ENST00000515529 PLPP6Q8IY26 295 aa26.41■■□□□ 1.82
DDR1-279ENST00000515529 CHST14Q8NCH0 376 aa26.41■■□□□ 1.82
DDR1-279ENST00000515529 TMIEQ8NEW7 156 aa26.41■■□□□ 1.82
DDR1-279ENST00000515529 OR2AP1Q8NGE2 309 aa26.41■■□□□ 1.82
DDR1-279ENST00000515529 FOXJ1Q92949 421 aa26.41■■□□□ 1.82
DDR1-279ENST00000515529 RNF25Q96BH1 459 aaPredicted RBP26.41■■□□□ 1.82
DDR1-279ENST00000515529 PPP1R16AQ96I34 528 aa26.41■■□□□ 1.82
DDR1-279ENST00000515529 ZNF830Q96NB3 372 aaPredicted RBP26.41■■□□□ 1.82
DDR1-279ENST00000515529 ZDHHC6Q9H6R6 413 aa26.41■■□□□ 1.82
DDR1-279ENST00000515529 PDFQ9HBH1 243 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms